Protein Alignment Rh6 and Opn1sw

DIOPT Version :10

• Sequence 1: NP_524368.5
• Gene: Rh6 / 41889
• FlyBaseID: FBgn0019940
• Length: 363
• Species: Drosophila melanogaster
• Sequence 2: NP_031564.1
• Gene: Opn1sw / 12057
• MGIID: 99438
• Length: 346
• Species: Mus musculus
• Alignment Length: 341
• Identity: 86/341 - (25%)
• Similarity: 161/341 - (47%)
• Gaps: 38/341 - (11%)

  Fly    42 LEPMW-----FGIIGFVIAILGTMSLAGNFIVMYIFTSSKGLRTPSNMFVVNLAFSDFMM-MFTM 100
            |.|:|     ...:|||. .:||..   |.||:......|.||.|.|..:||::...|:. :|::
Mouse    26 LAPVWAFRLQAAFMGFVF-FVGTPL---NAIVLVATLHYKKLRQPLNYILVNVSLGGFLFCIFSV 86

  Fly   101 FPPVVLNGFYGTWIMGPFLCELYGMFGSLFGCVSIWSMTLIAYDRYCVIVKGMARKPLTATAAVL 165
            | .|.:...:|.::.|..:|.|....||:.|.|:.||:..:|::||.||.|........:..|::
Mouse    87 F-TVFIASCHGYFLFGRHVCALEAFLGSVAGLVTGWSLAFLAFERYVVICKPFGSIRFNSKHALM 150

  Fly   166 RLMVVWTICGAWALMPLFGWNRYVPEGNMTACGTDYFAKDWWNRSYIIVYSLWV--YLTPLLTII 228
            .::..|.|....::.|.|||:|::|||...:||.|::......||....:.|::  ::.||..|.
Mouse   151 VVLATWIIGIGVSIPPFFGWSRFIPEGLQCSCGPDWYTVGTKYRSEYYTWFLFIFCFIIPLSLIC 215

  Fly   229 FSYWHIMKAVAAHEKAMREQAKKMNVASLRNSEADKSKAIEIKLAKVALTTISLWFFAWTPYTII 293
            |||..:::.:.|             ||:.:...|...|| |.:::.:.:..:..:...:.||..:
Mouse   216 FSYSQLLRTLRA-------------VAAQQQESATTQKA-EREVSHMVVVMVGSFCLCYVPYAAL 266

  Fly   294 NYAGIFESMHLSPLSTI-CGSVFAKANAVCNPIVYGLSHPKYKQVLREKMPCLACGK-----DDL 352
            ....:....|...|..: ..:.|:|::.|.|||:|...:.:::..:.|    :.|.|     .|:
Mouse   267 AMYMVNNRNHGLDLRLVTIPAFFSKSSCVYNPIIYCFMNKQFRACILE----MVCRKPMADESDV 327

  Fly   353 TSDSRTQATAEISESQ 368
            :...:|:.:. :|.|:
Mouse   328 SGSQKTEVST-VSSSK 342

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rh6	NP_524368.5	7tmA_photoreceptors_insect	48..338	CDD:320207	76/293 (26%)
		TM helix 1	49..75	CDD:320207	8/25 (32%)
		TM helix 2	82..108	CDD:320207	7/26 (27%)
		TM helix 3	120..150	CDD:320207	12/29 (41%)
		TM helix 4	161..181	CDD:320207	3/19 (16%)
		TM helix 5	208..237	CDD:320207	9/30 (30%)
		TM helix 6	267..297	CDD:320207	4/29 (14%)
		TM helix 7	306..331	CDD:320207	8/25 (32%)
Opn1sw	NP_031564.1	7tmA_SWS1_opsin	34..312	CDD:320204	76/296 (26%)
		TM helix 1	34..60	CDD:320204	8/29 (28%)
		TM helix 2	67..94	CDD:320204	7/27 (26%)
		TM helix 3	105..135	CDD:320204	12/29 (41%)
		TM helix 4	146..168	CDD:320204	4/21 (19%)
		TM helix 5	195..225	CDD:320204	8/29 (28%)
		TM helix 6	240..270	CDD:320204	5/30 (17%)
		TM helix 7	280..305	CDD:320204	8/24 (33%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	324..346		4/20 (20%)