Protein Alignment Rh6 and LOC11176013

DIOPT Version :10

• Sequence 1: NP_524368.5
• Gene: Rh6 / 41889
• FlyBaseID: FBgn0019940
• Length: 363
• Species: Drosophila melanogaster
• Sequence 2: XP_003435758.1
• Gene: LOC11176013 / 11176013
• -ID: -
• Length: 370
• Species: Anopheles gambiae
• Alignment Length: 370
• Identity: 225/370 - (60%)
• Similarity: 283/370 - (76%)
• Gaps: 9/370 - (2%)

  Fly     1 MASLHPPSF-AYMRDGRNLSLAESVPAEIMHMVDPYWYQWPPLEPMWFGIIGFVIAILGTMSLAG 64
            ||:...|.| |:.:.|.|:|:.:.||.|::|||.|:|.|:||:.|:|..|:||.|.:||.:|:.|
Mosquito     1 MAAFVEPHFDAWTQSGGNMSVVDKVPPEMLHMVHPHWNQFPPMNPLWHSILGFAIFMLGMISMTG 65

  Fly    65 NFIVMYIFTSSKGLRTPSNMFVVNLAFSDFMMMFTMFPPVVLNGFYGTWIMGPFLCELYGMFGSL 129
            |..||||||::|.||||||:.|||||||||.|||||.||:|:|.::.||..|||.||||.|.|||
Mosquito    66 NGCVMYIFTNTKSLRTPSNLLVVNLAFSDFFMMFTMGPPMVINCWHETWTFGPFACELYAMLGSL 130

  Fly   130 FGCVSIWSMTLIAYDRYCVIVKGMARKPLTATAAVLRLMVVWTICGAWALMPLFGWNRYVPEGNM 194
            |||.|||:||:||:|||.|||||:|.||:|...|:||::.||.....|.|.||||||||||||||
Mosquito   131 FGCASIWTMTMIAFDRYNVIVKGLAGKPMTNNGALLRILGVWVFALFWTLAPLFGWNRYVPEGNM 195

  Fly   195 TACGTDYFAKDWWNRSYIIVYSLWVYLTPLLTIIFSYWHIMKAVAAHEKAMREQAKKMNVASLRN 259
            |||||||..:.|.:|||||:|:::||..||||||:||..|:|||:||||.||||||||||||||.
Mosquito   196 TACGTDYLTQTWLSRSYIIIYAIFVYWLPLLTIIYSYTFILKAVSAHEKNMREQAKKMNVASLRT 260

  Fly   260 SEADKSKAIEIKLAKVALTTISLWFFAWTPYTIINYAGIFESMHLSPLSTICGSVFAKANAVCNP 324
            .|| ::.:.|:|||||||.||||||.|||||.:||:.|||::..:|||:||.||:|||||||.||
Mosquito   261 QEA-QNTSTEMKLAKVALVTISLWFMAWTPYLVINFTGIFKAAPISPLATIWGSLFAKANAVYNP 324

  Fly   325 IVYGLSHPKYKQVLREKMPCLACGKDDLTSDSR------TQATAE 363
            ||||:|||||:..|.:|.|.|:| :|....|.:      |||:.|
Mosquito   325 IVYGISHPKYRAALYQKFPSLSC-QDAPVDDGQSVASGATQASDE 368

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rh6	NP_524368.5	7tmA_photoreceptors_insect	48..338	CDD:320207	193/289 (67%)
		TM helix 1	49..75	CDD:320207	15/25 (60%)
		TM helix 2	82..108	CDD:320207	19/25 (76%)
		TM helix 3	120..150	CDD:320207	22/29 (76%)
		TM helix 4	161..181	CDD:320207	7/19 (37%)
		TM helix 5	208..237	CDD:320207	17/28 (61%)
		TM helix 6	267..297	CDD:320207	21/29 (72%)
		TM helix 7	306..331	CDD:320207	19/24 (79%)
LOC11176013	XP_003435758.1	7tmA_photoreceptors_insect	50..338	CDD:320207	193/288 (67%)
		TM helix 1	50..76	CDD:320207	15/25 (60%)
		TM helix 2	83..109	CDD:320207	19/25 (76%)
		TM helix 3	121..151	CDD:320207	22/29 (76%)
		TM helix 4	162..182	CDD:320207	7/19 (37%)
		TM helix 5	209..238	CDD:320207	17/28 (61%)
		TM helix 6	267..297	CDD:320207	21/29 (72%)
		TM helix 7	306..331	CDD:320207	19/24 (79%)