Protein Alignment Rh6 and prlhr

DIOPT Version :10

• Sequence 1: NP_524368.5
• Gene: Rh6 / 41889
• FlyBaseID: FBgn0019940
• Length: 363
• Species: Drosophila melanogaster
• Sequence 2: XP_002940396.1
• Gene: prlhr / 100497660
• XenbaseID: XB-GENE-994391
• Length: 343
• Species: Xenopus tropicalis
• Alignment Length: 363
• Identity: 75/363 - (20%)
• Similarity: 142/363 - (39%)
• Gaps: 61/363 - (16%)

  Fly    16 RNLSLAESV-PAEIMHMVDPYW-----YQWPPLEPMWFGIIGFVIAILGTMSLAGNFIVMYIFTS 74
            ||:|..:|: ||...:....:.     :.:..|....:.::.|.       .:.||::::|:...
 Frog     4 RNISTTQSLFPAMASNSSQQFMGLQLIHSYKALIIPCYSLVVFT-------GIFGNYLLIYVICR 61

  Fly    75 SKGLRTPSNMFVVNLAFSDFMMMFTMFPPVVLNGFYGT-WIMGPFLCELYGMFGSLFGCVSIWSM 138
            :|.:...:|..|.||||||.:|..|..|..:...|... |:.|.|||....:...:...||::::
 Frog    62 TKKMHNVTNFLVGNLAFSDMLMCATCVPLTLAYVFEPRGWVFGHFLCYFVFLMQPVTVYVSVFTL 126

  Fly   139 TLIAYDRYCVIVKGMARKPLTATAAVLRLMVVWTICGAWAL-----MPLFGWNRYV--PEGNMTA 196
            |:||.|||...|..:.|:....|.|       :.:.|.|.|     .|......:|  |:.:.:.
 Frog   127 TVIAVDRYHATVYPLRRRLTIPTCA-------YILAGIWLLSCLMAAPALAHTYHVEFPQLDFSI 184

  Fly   197 CGTDYFAKDWWNRSYIIVYSLWVYLTPLLTIIFSYWHIMKAVAAHEKAMREQAKKMN---VASLR 258
            |...:|..:....:|.....:..|..|.:.|..||             :|...|..|   ..::.
 Frog   185 CEEFWFGMEKKRLAYAYSTLILTYALPFIIIALSY-------------LRISVKLKNRVVPGNIT 236

  Fly   259 NSEADKSKAIEIKLAKVALTTISLWFFAWTPYTIINY-----AGIFESMHLSPLSTICGSVFAKA 318
            |.:|:..:|...|..::.:..:..:...|.|..|.|.     ..:.:..:.:.:..:| ...|..
 Frog   237 NVQAEWDRARRKKTFRLLVLVVGAFGMCWLPLHIFNIMKDIDIHLIDKQYFNLVQLLC-HWLAMM 300

  Fly   319 NAVCNPIVYGLSHPKYKQVLREKM-----------PCL 345
            :|..|.::|...|..::..|::..           ||:
 Frog   301 SACTNSLLYAWLHDSFRGELKKMFLWKRKRIGPTAPCV 338

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rh6	NP_524368.5	7tmA_photoreceptors_insect	48..338	CDD:320207	65/305 (21%)
		TM helix 1	49..75	CDD:320207	4/25 (16%)
		TM helix 2	82..108	CDD:320207	11/25 (44%)
		TM helix 3	120..150	CDD:320207	9/29 (31%)
		TM helix 4	161..181	CDD:320207	5/24 (21%)
		TM helix 5	208..237	CDD:320207	6/28 (21%)
		TM helix 6	267..297	CDD:320207	6/34 (18%)
		TM helix 7	306..331	CDD:320207	5/24 (21%)
prlhr	XP_002940396.1	7tmA_PrRP_R	35..320	CDD:320516	66/312 (21%)
		TM helix 1	36..62	CDD:320516	5/32 (16%)
		TM helix 2	69..94	CDD:320516	11/24 (46%)
		TM helix 3	108..138	CDD:320516	9/29 (31%)
		TM helix 4	149..170	CDD:320516	6/27 (22%)
		TM helix 5	196..225	CDD:320516	7/41 (17%)
		TM helix 6	245..275	CDD:320516	6/29 (21%)
		TM helix 7	288..313	CDD:320516	5/25 (20%)