Protein Alignment Rh6 and LOC100495677

DIOPT Version :10

• Sequence 1: NP_524368.5
• Gene: Rh6 / 41889
• FlyBaseID: FBgn0019940
• Length: 363
• Species: Drosophila melanogaster
• Sequence 2: XP_002932874.2
• Gene: LOC100495677 / 100495677
• XenbaseID: XB-GENE-29082783
• Length: 337
• Species: Xenopus tropicalis
• Alignment Length: 328
• Identity: 65/328 - (19%)
• Similarity: 120/328 - (36%)
• Gaps: 42/328 - (12%)

  Fly    53 VIAILGTMSLA-------GNFIVMYIFTSSKGLRTPSNMFVVNLAFSDFMMMFTMFPPVVLNGFY 110
            |:::..|:.:|       .|.:::.:|.|...|||.:....:||:..|.:....:.|..:.|..:
 Frog     4 VLSLFATIMIATSIGTVGANALLLVLFASHLKLRTDTWALTLNLSICDLIFGMCVVPIAIYNSLF 68

  Fly   111 --GTWIMGPFLCELYGMFGSLFGCVSIWSMTLIAYDRYCVIVKGMARKPL-TATAAVLRLMVVWT 172
              |.:..|...|:|.|....|....|:.|:.....|::..|...:....| |....:..|.::|.
 Frog    69 QGGIFAEGGIACQLLGFLFVLLQLASLNSLVWATIDKFAEIGFPLRYAQLITKKRIMFILAILWI 133

  Fly   173 ICGAWALMPLFGWNRYVPEGNMTACGTDYFAKDWW---------NRSYIIVYSLWVYLTPLLTII 228
            .....|.:|..|:..|            .|.||.:         ..:|.:::.....|.|:..|.
 Frog   134 YAIVVAALPFMGFGVY------------SFNKDVYMCLPAFGPSTTAYSVLFLTVGVLVPITGIS 186

  Fly   229 FSYWHIMKAVAAHEKAMREQAKKMNVASLRNSEADKSKAIEIKLAKVALTTISLWFF--AWTPYT 291
            ..|..|:...       |.|||:.....  |.:......|........:..:|.::.  .|.|..
 Frog   187 ILYLSIIHIA-------RYQAKRGTFVC--NDQHCYYVPIRSYFRNTLVLIVSAFYLLVCWLPSV 242

  Fly   292 IINYAGIFESMHLSPLSTICGSVFAKANAVCNPIVYGLSHPKYKQVLREKMPCLACGKDDLTSDS 356
            ||::...|.:.::..::.:.........:..||.:..|:...|::.|||....|....:.|.|.|
 Frog   243 IISFYETFYTSNVPVIAKMVSIWLVVLTSTLNPWINSLAQRNYRRALREGWRKLKRIFESLGSSS 307

  Fly   357 RTQ 359
            ..|
 Frog   308 ERQ 310

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rh6	NP_524368.5	7tmA_photoreceptors_insect	48..338	CDD:320207	57/305 (19%)
		TM helix 1	49..75	CDD:320207	5/28 (18%)
		TM helix 2	82..108	CDD:320207	4/25 (16%)
		TM helix 3	120..150	CDD:320207	7/29 (24%)
		TM helix 4	161..181	CDD:320207	3/19 (16%)
		TM helix 5	208..237	CDD:320207	6/28 (21%)
		TM helix 6	267..297	CDD:320207	6/31 (19%)
		TM helix 7	306..331	CDD:320207	3/24 (13%)
LOC100495677	XP_002932874.2	7tm_classA_rhodopsin-like	8..277	CDD:410626	54/289 (19%)
		TM helix 1	8..33	CDD:410626	4/24 (17%)
		TM helix 2	40..66	CDD:410626	4/25 (16%)
		TM helix 3	80..110	CDD:410626	7/29 (24%)
		TM helix 4	123..142	CDD:410626	3/18 (17%)
		TM helix 5	166..191	CDD:410626	5/24 (21%)
		TM helix 6	217..248	CDD:410626	6/30 (20%)
		TM helix 7	257..277	CDD:410626	2/19 (11%)