Protein Alignment Rh6 and opn8

DIOPT Version :10

• Sequence 1: NP_524368.5
• Gene: Rh6 / 41889
• FlyBaseID: FBgn0019940
• Length: 363
• Species: Drosophila melanogaster
• Sequence 2: XP_004915005.1
• Gene: opn8 / 100493595
• XenbaseID: XB-GENE-983567
• Length: 353
• Species: Xenopus tropicalis
• Alignment Length: 337
• Identity: 87/337 - (25%)
• Similarity: 154/337 - (45%)
• Gaps: 54/337 - (16%)

  Fly    31 MVDPYWYQWPPLEPMWFGIIGFVIAILGTMSLAGNFIVMYIFTS-SKGLRTPSNMFVVNLAFSDF 94
            |.:.|..:..||.....|:...::|||   ::.||..|:..... |..|:.| ::..:|||.:|.
 Frog     1 MEERYLSKLHPLVDFGAGVFLLLVAIL---TVLGNCAVLATAVKCSSHLKAP-DLLSINLAVADL 61

  Fly    95 MMMFTMFPPVVLNGFYGTWIMGPFLCELYGMFGSLFGCVSIWSMTLIAYDRY----------CVI 149
            .|..:|:|..:.:.:...|:.|...|..|.:.|..||..|:.::|::|..||          |.|
 Frog    62 GMAISMYPLAIASAWNHAWLGGDASCLYYALMGFFFGVSSMMTLTVMAIIRYRVTSSFKYSGCTI 126

  Fly   150 VKGMARKPLTATAAVLRLMVVWTICGAWALMPLFGWNRYVPEGNMTAC----GTDYFAKDWWNRS 210
            .|         .|..:.:|.:|.....||::||.||.||.||...|:|    |..:.:.:.:  |
 Frog   127 EK---------KAVCILIMCIWLYALLWAVLPLLGWGRYGPEPFGTSCTIAWGDFHHSSNGF--S 180

  Fly   211 YIIVYSLWVYLTPLLTIIFSY----WHIMKAVAAHEKAMREQAKKMNVASLRNSEADKSKAIEIK 271
            :||...:...::|.:||:..|    |.:.||.    :.::.|.|..|           |..:|.|
 Frog   181 FIISMFILCTISPAVTIVVCYSGIAWKLHKAY----QEIKNQDKIPN-----------STKVEKK 230

  Fly   272 LAKVALTTISLWFFAWTPYTIINYAGIF-ESMHLSPLSTICGSVFAKANAVCNPIVYGLSHPKYK 335
            |..:|:.....:..:||||..:::..:| .|.::.|:.::...:|||::...||::|    ..:.
 Frog   231 LTLLAILVSFGFLISWTPYAAVSFWSLFHSSKYIPPVVSLLPCLFAKSSTAFNPMIY----YAFS 291

  Fly   336 QVLREKMPCLAC 347
            :..|.|:..|.|
 Frog   292 KTFRRKVKHLKC 303

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rh6	NP_524368.5	7tmA_photoreceptors_insect	48..338	CDD:320207	79/309 (26%)
		TM helix 1	49..75	CDD:320207	6/26 (23%)
		TM helix 2	82..108	CDD:320207	7/25 (28%)
		TM helix 3	120..150	CDD:320207	11/39 (28%)
		TM helix 4	161..181	CDD:320207	5/19 (26%)
		TM helix 5	208..237	CDD:320207	8/32 (25%)
		TM helix 6	267..297	CDD:320207	8/29 (28%)
		TM helix 7	306..331	CDD:320207	7/24 (29%)
opn8	XP_004915005.1	7tmA_Opsin5_neuropsin	17..298	CDD:320202	80/314 (25%)
		TM helix 1	17..42	CDD:320202	7/27 (26%)
		TM helix 2	49..76	CDD:320202	8/27 (30%)
		TM helix 3	87..117	CDD:320202	10/29 (34%)
		TM helix 4	131..149	CDD:320202	4/17 (24%)
		TM helix 5	178..208	CDD:320202	8/31 (26%)
		TM helix 6	226..256	CDD:320202	8/29 (28%)
		TM helix 7	266..291	CDD:320202	7/28 (25%)