Protein Alignment Rh6 and avpr1a

DIOPT Version :10

• Sequence 1: NP_524368.5
• Gene: Rh6 / 41889
• FlyBaseID: FBgn0019940
• Length: 363
• Species: Drosophila melanogaster
• Sequence 2: XP_002931664.1
• Gene: avpr1a / 100488869
• XenbaseID: XB-GENE-482551
• Length: 411
• Species: Xenopus tropicalis
• Alignment Length: 385
• Identity: 86/385 - (22%)
• Similarity: 150/385 - (38%)
• Gaps: 71/385 - (18%)

  Fly    17 NLSLAESVPAEIMHMVDPYWYQWPPLEPMWFGIIG--FVIAILGTMSLAGNFIVMYIFTSSKGLR 79
            |.:|..|..::|....||| .:...|..:...|:.  ||.|:||..|:   .|.:|   .||...
 Frog    25 NSTLFNSSSSQIDPTADPY-VRNEALAKIEIAILAIIFVAAVLGNCSV---LIGLY---KSKKKT 82

  Fly    80 TPSNMFVVNLAFSDFMMMFTMFPPVVLNGFYGTW-----IMGP-FLC------ELYGMFGSLFGC 132
            :..::|:.:|:.:|..:.|....|.:      .|     ..|| .||      :::|||.|.:
 Frog    83 SRMHLFIKHLSLADLAVAFFQVLPQL------CWEVTYRFRGPDILCRIVKHLQVFGMFASAY-- 139

  Fly   133 VSIWSMTLIAYDRYCVIVKGMARKPL-TATAAVLRLMVVWTICGAWALMPLFGWNRYVPEGNMTA 196
                .:.::..|||..|.     .|| |......|..|:  |..||.:..|....:|........
 Frog   140 ----MLVVMTADRYIAIC-----HPLKTLQQPTKRSYVM--IISAWIISFLLSIPQYFIFSFSPV 193

  Fly   197 CGTD------YFAKDWWNRSYIIVYSLWVYLTP--LLT-----IIFSYWHIMKAVAAHEKAMREQ 248
            .|::      :|.:.|..|:||...:..:::.|  :||     |.::.|..::.     |..||:
 Frog   194 NGSEVYDCWAHFIQPWGARAYITWMTASIFVVPVAILTTCYGFICYNIWRNIQC-----KTKREE 253

  Fly   249 AKKMNVASLRNSEADKSKAI---EIKLAKVALTTISLWFFAWTPYTIINYAGI----FESMHLSP 306
            .:......|.::.....|.|   :|:..|:.|..::.:...|.|:.|:....:    ||......
 Frog   254 NEGRKSHGLLSTSVSSVKTISRAKIRTVKMTLVIVTAYILCWAPFFIVQMRSVWDKNFEWTDSED 318

  Fly   307 LSTICGSVFAKANAVCNPIVYGLSHPKYKQVLREKMPCL-----ACGKDDLTSDSRTQAT 361
            ::|...::....|:.|||.:|........|......||.     ...|:|..|.:|.|.:
 Frog   319 IATTVTALLGSLNSCCNPWIYMFFSGHLLQDFIHSFPCFQKIKQTFSKEDSDSSTRRQTS 378

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rh6	NP_524368.5	7tmA_photoreceptors_insect	48..338	CDD:320207	71/324 (22%)
		TM helix 1	49..75	CDD:320207	9/27 (33%)
		TM helix 2	82..108	CDD:320207	5/25 (20%)
		TM helix 3	120..150	CDD:320207	8/35 (23%)
		TM helix 4	161..181	CDD:320207	5/19 (26%)
		TM helix 5	208..237	CDD:320207	8/35 (23%)
		TM helix 6	267..297	CDD:320207	7/32 (22%)
		TM helix 7	306..331	CDD:320207	6/24 (25%)
avpr1a	XP_002931664.1	7tmA_V1aR	51..350	CDD:320507	71/328 (22%)
		TM helix 1	52..78	CDD:320507	9/31 (29%)
		TM helix 2	85..112	CDD:320507	6/32 (19%)
		TM helix 3	123..153	CDD:320507	8/35 (23%)
		TM helix 4	165..186	CDD:320507	6/22 (27%)
		TM helix 5	211..240	CDD:320507	7/28 (25%)
		TM helix 6	275..305	CDD:320507	6/29 (21%)
		TM helix 7	318..343	CDD:320507	6/24 (25%)
		V1R_C	363..411	CDD:430355	5/16 (31%)