DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rh6 and taar20j

DIOPT Version :10

Sequence 1:NP_524368.5 Gene:Rh6 / 41889 FlyBaseID:FBgn0019940 Length:363 Species:Drosophila melanogaster
Sequence 2:XP_073770672.1 Gene:taar20j / 100329273 ZFINID:ZDB-GENE-060414-15 Length:344 Species:Danio rerio


Alignment Length:318 Identity:74/318 - (23%)
Similarity:130/318 - (40%) Gaps:68/318 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 IIGFVIAILGTMSLAGNFIVMYIFTSSKGLRTPSNMFVVNLAFSDFMMMFTMFPPVVLNGFYGTW 113
            ||...:::|...::..|.:|:...:..|.|.||:||.:::||.:|.::...| |...:......|
Zfish    47 IIYVFVSLLSAWTVFLNLLVIISISHFKKLHTPTNMIILSLAVTDLLIGLVM-PVEAIRLIDKCW 110

  Fly   114 IMGPFLCELYGMFGSLFGCVSIWSMTLIAYDRYCVIVKGMA-RKPLTATAAVLRLMVVWT----- 172
            ..|...|.||.:|.||...||:.::.|||.|||..:...:. .:.:|.|..::.:.:.|.     
Zfish   111 YFGNTFCGLYMLFVSLLVTVSLGNLVLIAVDRYVAVCHPLLYPQRITITKTLVSICLNWVCFSAY 175

  Fly   173 ----------------IC-GAWALMPLFGWNRYVPEGNMTACGTDYFAKDWWNRSYIIVYSLWVY 220
                            :| |...:|..|||           ..||.|..               :
Zfish   176 CTALIINNSFFDTQTDVCYGQCLVMVSFGW-----------IATDLFIS---------------F 214

  Fly   221 LTPLLTIIFSYWHIMKAVAAHEKAMREQAKKMNVASLRNSEADKSKAIEIKL-AKVALT---TIS 281
            :.|.|.||..|..|...|       .:|.|.:| :.::..:.....:::.|. :|.|||   .:|
Zfish   215 IFPCLLIISLYLRIFYVV-------HQQVKVIN-SLMKGGKCVTEGSVKRKSESKAALTLGIIVS 271

  Fly   282 LWFFAWTPYTIINYAGIFESMHLSPLSTICGSVFAKANAVCNPIVYGLSHPKYKQVLR 339
            ::...:.||.|.:.. :..|..|:.|..:     ..||:..||:||.|.:..:|:..:
Zfish   272 VFLLCYIPYYICSLT-VNSSTALNVLVWV-----LYANSGLNPLVYALFYSWFKKTAK 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rh6NP_524368.5 7tmA_photoreceptors_insect 48..338 CDD:320207 74/315 (23%)
TM helix 1 49..75 CDD:320207 5/25 (20%)
TM helix 2 82..108 CDD:320207 7/25 (28%)
TM helix 3 120..150 CDD:320207 14/29 (48%)
TM helix 4 161..181 CDD:320207 4/41 (10%)
TM helix 5 208..237 CDD:320207 6/28 (21%)
TM helix 6 267..297 CDD:320207 9/33 (27%)
TM helix 7 306..331 CDD:320207 8/24 (33%)
taar20jXP_073770672.1 None

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