DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rh6 and taar15

DIOPT Version :10

Sequence 1:NP_524368.5 Gene:Rh6 / 41889 FlyBaseID:FBgn0019940 Length:363 Species:Drosophila melanogaster
Sequence 2:NP_001076508.1 Gene:taar15 / 100034377 ZFINID:ZDB-GENE-041014-50 Length:328 Species:Danio rerio


Alignment Length:289 Identity:65/289 - (22%)
Similarity:130/289 - (44%) Gaps:18/289 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 IAILGTMSLAGNFIVMYIFTSSKGLRTPSNMFVVNLAFSDFMMMFTMFPPVVLNGFYGTWIMGPF 118
            |:.:..:::.||.:|:...|..|.|.||:|:.:::||.||.::...:.|...:......:.||..
Zfish    33 ISAISVLTVCGNLLVIVSITVFKQLHTPTNLLILSLAISDLLVGICLMPVESIRSINSCFYMGKS 97

  Fly   119 LCELYGMFGSLFGCVSIWSMTLIAYDRYCVIVKGMA-RKPLTATAAVLRLMVVWTICGAWALMPL 182
            .|.::....|:.|..|:.::.|:|.|||..:...:. ...:|...|::.:.:.||:...:.|:|:
Zfish    98 HCHIFHSIMSIVGSASLMNIMLVAIDRYFAVCNPLLYMSKMTIRKALICVCLGWTVSICYNLVPV 162

  Fly   183 FGWNRYVPEGNMTACGTD--YFAKDWWNRSYIIVYSLWVYLTPLLTIIFSYWHIMKAVAAHEKAM 245
             ......|.|.:..|..:  ....:.|..:.:||    .::.|.:.::..|..|:.......||:
Zfish   163 -NLGNSDPTGAVVVCLRECAVAVSNSWGPADLIV----SFIAPCIMMLILYTRILTVALKQAKAI 222

  Fly   246 REQAKKMNVASLRNSEADKSKAIEIKLAKVALTTISLWFFAWTPYTIINYAGIFESMHLSPLSTI 310
            ....||        :.:..|:..|:|..|...|.|.::|..|.|:.:|...  .|..:..|:|..
Zfish   223 SNMTKK--------NGSQPSRKSEVKATKTLSTIIFVYFICWIPWYVIMLN--MEQFNKLPVSIS 277

  Fly   311 CGSVFAKANAVCNPIVYGLSHPKYKQVLR 339
            ........|:..||.:|.:|:|.:|:.::
Zfish   278 AFLCLFYTNSCINPFIYAISYPWFKRSVK 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rh6NP_524368.5 7tmA_photoreceptors_insect 48..338 CDD:320207 65/286 (23%)
TM helix 1 49..75 CDD:320207 5/20 (25%)
TM helix 2 82..108 CDD:320207 6/25 (24%)
TM helix 3 120..150 CDD:320207 9/29 (31%)
TM helix 4 161..181 CDD:320207 4/19 (21%)
TM helix 5 208..237 CDD:320207 5/28 (18%)
TM helix 6 267..297 CDD:320207 9/29 (31%)
TM helix 7 306..331 CDD:320207 6/24 (25%)
taar15NP_001076508.1 7tmA_TAARs 27..305 CDD:320183 65/286 (23%)
TM helix 1 28..54 CDD:320183 5/20 (25%)
TM helix 2 61..87 CDD:320183 6/25 (24%)
TM helix 3 99..129 CDD:320183 9/29 (31%)
TM helix 4 141..164 CDD:320183 5/23 (22%)
TM helix 5 185..214 CDD:320183 6/32 (19%)
TM helix 6 236..266 CDD:320183 9/31 (29%)
TM helix 7 273..298 CDD:320183 6/24 (25%)

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