DRSC/TRiP Functional Genomics Resources

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Protein Alignment AdamTS-A and Adamts4

DIOPT Version :9

Sequence 1:NP_996218.1 Gene:AdamTS-A / 41887 FlyBaseID:FBgn0286071 Length:1688 Species:Drosophila melanogaster
Sequence 2:NP_076449.1 Gene:Adamts4 / 66015 RGDID:621242 Length:851 Species:Rattus norvegicus


Alignment Length:914 Identity:282/914 - (30%)
Similarity:418/914 - (45%) Gaps:159/914 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   194 STHPLANSPPATPATLHPRRLDNDTSTDHE--------PP-----DGLDDLDEEEHSAFVMPTKV 245
            |.||..::...:...|||||    ..|.|.        ||     .||:...:....|.::|.. 
  Rat     3 SIHPSCSTGTMSRMGLHPRR----GLTGHRLRRLQPCLPPRTVPFSGLERWQQLLLLASLLPLA- 62

  Fly   246 YNYSLS----EADLIYESKRNSDINSFLKESASAFAMTGTYRNMSNEIWDPHPQYNLNVFGRQLH 306
              :|.|    |.::::..|.|         .:|....:|....:         .|.|..||..|.
  Rat    63 --WSASPLPREEEIVFPEKLN---------GSSIIPGSGVPARL---------LYRLPAFGEILL 107

  Fly   307 LVLRQDASFVHNHSMTHIRILKEGEEHPGPETEAEAEQRHLGCFYSGYVEDDPHSMVSVSL-CGG 370
            |.|.||.. |....:| ::.|.:     .||....||.   |.:.:|.:..||.|:.|:.. .|.
  Rat   108 LELEQDPG-VQVEGLT-VQYLGQ-----APEMLGGAEP---GTYLTGTINGDPESVASLHWDRGA 162

  Fly   371 MTGYIKTSFGALLIQPVN----RTSSDEVLHRVFRKSQRNARHAVSKFELGLDDFMSKLEQVQEE 431
            :.|.::.....|.:||:.    .::.....|.:.|||..:.|..:...                :
  Rat   163 LLGVLQYRGAELHLQPLEGGALNSAGGPGAHILRRKSPASNRGPICNV----------------K 211

  Fly   432 EQKSKSRKLNRKKRHYADVDNQVYTLEVLIAVDNSMKQFHGEDLQPYILILMSIVSSIFADASIG 496
            ........::|:.:.:|.:...|   |.|:..|:.|..|||..|:.|:|.:|:..:..|...||.
  Rat   212 APSGSPSPISRRNKRFASLSRFV---ETLVVADDKMAAFHGAGLKHYLLTVMAAAAKAFKHPSIR 273

  Fly   497 NSIRILLVRLISL------PNINDQTHSSNEMLKHFCQFINQSGYER---------DTAMLITRE 546
            |.:.:::.||:.|      |.:..   |:.:.|:.||.:  |.|...         |||:|.||:
  Rat   274 NPVNLVVTRLVILGSGQEVPQVGP---SAAQTLRSFCTW--QKGLNPPNDSDPDHFDTAILFTRQ 333

  Fly   547 PICGSVPGKICHMLGLAELGTVCS-SSSCSIVQDTGLPTAFTMAHELGHILNMNHDDDDKCMPYV 610
            .:||.   ..|..||:|.:||||. :.||:||:|.||.:|||.||||||:.||.||:...|....
  Rat   334 DLCGV---STCDALGMAGVGTVCDPARSCAIVEDDGLQSAFTAAHELGHVFNMLHDNSKPCANLN 395

  Fly   611 TRQNNNKVLHIMSSVMGIHMHPWS-WSKCSRHFVSEFLEKTDKSCL--ETSVGAHIPYGTERLPG 672
            .:.::::  |:|:.||. |:.|.. ||.||..|:::||:.....||  :.....|:|.   ..||
  Rat   396 GQGSSSR--HVMAPVMA-HVDPEEPWSPCSARFITDFLDNGYGHCLLDKPEAPLHLPV---TFPG 454

  Fly   673 EIYSLDAQCQLSFGNDFGYCP-TDEECKRLWCNRTSG--NSNEQCASSNLPWADGTPCGSSGHWC 734
            :.|..|.||||:||.|..:|| ....|..|||   .|  |.:..|.:.:.|||||||||.: ..|
  Rat   455 KDYDADRQCQLTFGPDSSHCPQLPPPCAALWC---FGHLNGHAMCQTKHSPWADGTPCGPA-QAC 515

  Fly   735 QRGKC--VSNKHGYGRQVNGGWGPWTPFTPCSLTCGGGVQESRRECNQPVPENGGKYCTGSRKKY 797
            ..|:|  |.....:.....||||||.|:..||.|||||||.|.|:|.:|||.||||||.|.|..:
  Rat   516 MGGRCLHVDQLKDFNIPQAGGWGPWGPWGDCSRTCGGGVQFSSRDCTKPVPRNGGKYCEGRRTPF 580

  Fly   798 RSCNTHQCPPGS-MDPREQQCYAMNGRN---MNIPGVNPDTKWVPKY----EKDACKLFCRMDMK 854
            |||||..||.|| :..||:||.|.|.|.   .:.||   ...|||:|    .:|.|||.|:....
  Rat   581 RSCNTKNCPHGSALTFREEQCAAYNHRTDLFKSFPG---PMDWVPRYTGVAPRDQCKLTCQARAL 642

  Fly   855 VTYFMLKSMVTDGTSCAVDSFDKCVNGICRPAGCDNELNSIAKLDKCGVCEGRNDTCHEVTGNLL 919
            ..|::|:..|.|||.|:.||...||.|.|..||||..:.|..|.|||.||.|...:|.:.:|:. 
  Rat   643 GYYYVLEPRVADGTPCSPDSSSVCVQGRCIHAGCDRIIGSKKKFDKCMVCGGNGSSCSKQSGSF- 706

  Fly   920 VSNLLGLNDGNEPNKTLYY----VTRIPKGASNIIITQRGYPDQN--FIVLTDDRDNELLNGKF- 977
                          |...|    |..||.|.::|::.|:|.....  ::.|.....:..|||:: 
  Rat   707 --------------KKFRYGYSDVVTIPAGRTHILVRQQGGSGLKSIYLALKLADGSYALNGEYT 757

  Fly   978 LKTYPLKFVYAG-VTMQYTGSSSVVEQVNTTYSWKLSRDLIVQIISLDVSPSKRQDTVLLSYSYT 1041
            |.......|..| |:::|:|.::..|.::       ....:.|.::|.|..:.....|.|.||:.
  Rat   758 LMPSSTDVVLPGAVSLRYSGRTAASETLS-------GHGPLAQPLTLQVLVAGNPQNVRLRYSFF 815

  Fly  1042 IDKP 1045
            :.:|
  Rat   816 VPRP 819

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdamTS-ANP_996218.1 Pep_M12B_propep 286..394 CDD:279848 27/112 (24%)
ZnMc_ADAMTS_like 455..655 CDD:239801 75/216 (35%)
Reprolysin 457..655 CDD:279729 75/214 (35%)
Salp15 <696..745 CDD:288931 20/52 (38%)
TSP1 754..806 CDD:214559 33/51 (65%)
ADAM_spacer1 937..1042 CDD:283607 26/112 (23%)
TSP1 1172..1229 CDD:214559
GON 1495..1687 CDD:285848
Adamts4NP_076449.1 Pep_M12B_propep 92..195 CDD:279848 28/121 (23%)
Reprolysin 232..442 CDD:279729 78/223 (35%)
ZnMc_ADAMTS_like 232..439 CDD:239801 77/220 (35%)
ADAM_CR 452..523 CDD:301627 32/74 (43%)
TSP1 545..589 CDD:214559 28/43 (65%)
ADAM_spacer1 701..816 CDD:283607 28/136 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 83 1.000 Domainoid score I8136
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D125522at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100241
Panther 1 1.100 - - O PTHR13723
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.820

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