DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AdamTS-A and adamts2a

DIOPT Version :9

Sequence 1:NP_996218.1 Gene:AdamTS-A / 41887 FlyBaseID:FBgn0286071 Length:1688 Species:Drosophila melanogaster
Sequence 2:XP_700384.3 Gene:adamts2a / 571682 ZFINID:ZDB-GENE-070816-3 Length:1295 Species:Danio rerio


Alignment Length:1271 Identity:337/1271 - (26%)
Similarity:514/1271 - (40%) Gaps:348/1271 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   245 VYNYSLSEADLIYESKRNSDINSFLKE--------------------SASAFAMTGTYR------ 283
            ::......||.:|.:.....:...|:|                    |||..:..|::|      
Zfish    11 IFFLHFQRADTLYIANSIDSLQHVLREYGLVRPVSVDADGHFLTHAVSASRLSGQGSHRRRRRQA 75

  Fly   284 NMSNEIWDPHPQ----YNLNVFGRQLHLVLRQDASFVHNHSMTHIRILKEGEEHPGPETE--AEA 342
            |...|  ..|.:    ||:.|:|::.||.||.::..|                .||.:.|  .:.
Zfish    76 NQQGE--TDHLRETLFYNVTVYGQEFHLRLRLNSRLV----------------APGAKVEWLEDD 122

  Fly   343 EQRH------LGCFYSGYVEDDPHSMVSVSLCGGMTGYIKTSFGALLIQPVNR----TSSDE--- 394
            .|.|      ..|.|.|||.:...:.|::|.|.|:.|.|:.......|:|:.|    |..:|   
Zfish   123 NQTHSEPLLPSDCLYVGYVTNVQDTSVAISNCDGLAGMIRAGQEEFFIEPLERGGDMTGEEEGGP 187

  Fly   395 VLHRVFRKSQRNARHAVSKFELGLDDF---------MSKLEQVQEEEQKSKSRKLNRKKRH--YA 448
            ..|.:..:|....:.||::    ..||         ::.||.:.:..:|    |:|.:.|.  |.
Zfish   188 GRHHIVYRSSDIKKPAVNQ----PADFHPRGSPLGGLAALELLPQHVKK----KINSRARRETYE 244

  Fly   449 DVDNQVYTLEVLIAVDNSMKQFHG-EDLQPYILILMSIVSSIFADASIGNSIRILLVRLISLPNI 512
            |   :::.:|||:.||.|:..||| |.:|.|:|.||:||:.|:.|:::|..|.::|||::.|.:.
Zfish   245 D---EIFNIEVLLGVDCSVVMFHGREHIQKYLLTLMNIVNEIYQDSTLGAHINVVLVRIMMLCSS 306

  Fly   513 ND----QTHSSNEMLKHFCQFI--------NQSGYERDTAMLITRE-----------PICGSVPG 554
            ..    :..::::.|::.|::.        |.:.| .|.|:.:||:           |:.|    
Zfish   307 KSMGLIELGNASQSLENVCRWAFLQQKEDKNDAEY-HDHAIFLTRQEFGPTGMQGYAPVTG---- 366

  Fly   555 KICHMLGLAELGTVCSSSSCSIVQDTGLPTAFTMAHELGHILNMNHDDD-DKCMPYVTRQNNNKV 618
             :||.:           .||::..:.|..:||.:|||.||:|.|.||.. ::|...|...:    
Zfish   367 -MCHPV-----------RSCTLNHEDGFSSAFVVAHETGHVLGMEHDGQANECGDEVPMGS---- 415

  Fly   619 LHIMSSVMGIHMHPWSWSKCSRHFVSEFLEKTDKSCLETSVGAHIPYGTE-----RLPGEIYSLD 678
              ||:.::....|.:.||:||:..:..:|...|  ||...     |:..|     :|||..||:|
Zfish   416 --IMAPLVQAAFHRFHWSRCSQQELRRYLNTYD--CLRDD-----PFDHEWPTLPQLPGLQYSMD 471

  Fly   679 AQCQLSFGNDFGYC---PTDEECKRLWCNRTSGNSNEQCASSNLPWADGTPCGSSGHWCQRGKCV 740
            .||:..||..:..|   .|.:.||:|||:..  .:...|.:...|..|||.| :||..|.:|.|:
Zfish   472 EQCRFDFGMGYMMCTAYSTYDPCKQLWCSHP--ENPFFCKTKKGPPIDGTKC-ASGKNCFKGHCI 533

  Fly   741 SNKHGYGRQVNGGWGPWTPFTPCSLTCGGGVQESRRECNQPVPENGGKYCTGSRKKYRSCNTHQC 805
            .......| ::|.||.||.|..||.||||||:...||||.|||.|||:.|.|:..:::.|||.:|
Zfish   534 KLTPDILR-LDGHWGQWTKFGSCSRTCGGGVRFRTRECNNPVPANGGRTCYGNNYEFQLCNTEEC 597

  Fly   806 PPGSMDPREQQC------YAMNGRNMNIPGVNPDTKWVPKYE----KDACKLFCRMDMKVTYFML 860
            ....:|.||:||      :...|...:         |:| ||    .:.|:|:|:.........:
Zfish   598 AEALVDFREEQCKMWDPHFEHEGNKHH---------WLP-YEHSEPDERCQLYCQSKETGDVVSM 652

  Fly   861 KSMVTDGTSCAV-DSFDKCVNGICRPAGCDNELNSIAKLDKCGVCEGRNDTCHEVTGNLLVSNLL 924
            |.||.|||.|:. |.:..||.|.|...||||.:.|..:.||||||.|.|.||..|.||...|.  
Zfish   653 KRMVHDGTRCSYKDPYSVCVRGECEKVGCDNVIASELEDDKCGVCGGDNSTCKIVKGNFTRST-- 715

  Fly   925 GLNDGNEPNKTLYYVTRIPKGASNIIITQ-RGYPDQNFIVLTDDRDNELLN--GKFLKTYPLKFV 986
                 .:|.  ...:..||:||.:|.|.: :|.| ....|.....|:..||  |.|.::..:  :
Zfish   716 -----RKPG--FLKILEIPRGARHIQIHEFKGTP-HILAVKNQATDHLFLNDEGDFPESRTV--I 770

  Fly   987 YAGVTMQYTGSSSVVEQVNTTYSWKLSRDLIVQIISLDVSPSKRQDTVLLSYSYTIDKPPDYEAE 1051
            ..||..:||.:.. :|.|.||  ..|...:::.:.|..:|      .|.:||.|.:.:.|....|
Zfish   771 EKGVAWEYTNNDD-METVQTT--GPLRYGVLIMVQSHSIS------KVTISYKYILPEDPLSSME 826

  Fly  1052 VEI-------YRWEMQAPSNCDSLC-EGRSHRLPACISTTQGVKVAPQFCDKSAMPKIDDRACNT 1108
            ..:       :.|.::..|:|...| .|:.:....|...:.|..|....|.....|:...|||| 
Zfish   827 NTLPQDDTIYFEWALRKWSHCSKPCGGGKQYTRFGCRRKSDGKMVHRTLCANIPKPRAISRACN- 890

  Fly  1109 DCRLNLTVTSISECSAACGELGTREKTYACVQTFTNMQRSNIVDMSYCKLKFDVAYHEECREGCW 1173
                                                                    .:||.|..|
Zfish   891 --------------------------------------------------------QKECSEPIW 899

  Fly  1174 VLSEWSTCSKSCG-TGSQQREAHCY---LHNS--RVSDDLCN---PR-TKPHLNTLIGICNTESC 1228
            |..||..|||||| ||||.|...|.   |..|  .::...||   |. .:|        ||.:.|
Zfish   900 VTGEWEECSKSCGKTGSQTRPVRCVRPELDGSYKAINAKYCNDDRPEGRRP--------CNRQLC 956

  Fly  1229 PTYTKSPNALAVSNWVIGEWGECNEWC---EKTRSVSCSHP-YGIG-CGSRKPKDVRKCCHIKYT 1288
            |           ::|..|.|.:|:..|   .:.|.|.||.| ..|| |...||:.||.|......
Zfish   957 P-----------AHWRTGPWSQCSVSCGNGTQERQVMCSTPDNAIGICMDTKPQSVRSCLPAPCP 1010

  Fly  1289 SDWTDCSVQCGEGVKRKKQSCTRVYKPDVPGTRKRRVYVDESYCISRKVHRPKLRTTTKSCRINC 1353
            :|..:..:|.          .:|. .|:.|.                    ||:     |.|..|
Zfish  1011 NDRGNFLIQW----------LSRA-DPEFPA--------------------PKI-----SSRSRC 1039

  Fly  1354 KWNASDWRR----------------CPADCSEEYQT 1373
            |.:.|.:.|                |...|||...|
Zfish  1040 KGDKSVFCRMEVLSMYCSNPGYRQMCCKSCSETNYT 1075

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdamTS-ANP_996218.1 Pep_M12B_propep 286..394 CDD:279848 31/123 (25%)
ZnMc_ADAMTS_like 455..655 CDD:239801 62/224 (28%)
Reprolysin 457..655 CDD:279729 62/222 (28%)
Salp15 <696..745 CDD:288931 16/48 (33%)
TSP1 754..806 CDD:214559 28/51 (55%)
ADAM_spacer1 937..1042 CDD:283607 29/107 (27%)
TSP1 1172..1229 CDD:214559 24/66 (36%)
GON 1495..1687 CDD:285848
adamts2aXP_700384.3 Pep_M12B_propep 79..193 CDD:279848 33/131 (25%)
ZnMc_ADAMTS_like 249..449 CDD:239801 63/224 (28%)
Reprolysin 250..452 CDD:279729 64/231 (28%)
TSP1 546..597 CDD:214559 28/50 (56%)
ADAM_spacer1 705..818 CDD:283607 34/133 (26%)
TSP1 899..957 CDD:214559 24/65 (37%)
TSP1 959..1010 CDD:214559 18/50 (36%)
PLAC 1039..1070 CDD:285849 5/30 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR13723
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.