DRSC/TRiP Functional Genomics Resources

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Protein Alignment AdamTS-A and paplna

DIOPT Version :10

Sequence 1:NP_996218.1 Gene:AdamTS-A / 41887 FlyBaseID:FBgn0286071 Length:1688 Species:Drosophila melanogaster
Sequence 2:XP_005169942.1 Gene:paplna / 562930 ZFINID:ZDB-GENE-070815-4 Length:1187 Species:Danio rerio


Alignment Length:918 Identity:211/918 - (22%)
Similarity:300/918 - (32%) Gaps:278/918 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   750 VNGGWGPWTPFTPCSLTCGGGVQESRRECNQPVPE--NGGKYCTGSRKKYRSCNTHQCPPGSMDP 812
            :...||.|:.:..||.:|||||....|.|   |..  :||..|.|..|.|||||...||.||.|.
Zfish    20 IGDNWGEWSSYGECSRSCGGGVTMRTRRC---VTHRTDGGHSCVGPDKSYRSCNIQDCPEGSRDF 81

  Fly   813 REQQCYAMNGRNMNIPGVNPDTKWVPKY-EKDACKLFCRMDMKVTYFMLKSMVTDGTSCAVDSFD 876
            ||:||...:|.:..    ....||:|.| .::.|:|.|....:..|:..||.|.|||.|.....|
Zfish    82 REEQCSQFDGTDFQ----GKRYKWLPYYGGENPCELNCIPRGENFYYRQKSSVVDGTPCRPGGKD 142

  Fly   877 KCVNGICRPAGCDNELNSIAKLDKCGVCEGRNDTCHEVTGNLLVSNL-LGLNDGNEPNKTLYYVT 940
            .||:|:|:..|||:.|.|..:.|.|..|.|...:|..:..:..:.|| .|.|.          :.
Zfish   143 ICVDGLCKRLGCDHMLESPQEEDACLQCGGDGQSCSRLKNSFSMRNLPKGYNQ----------MF 197

  Fly   941 RIPKGASNIIITQRGYPDQNFIVLTDDRDNELLNGKFLKTYPLKFVYAGVTMQY----------- 994
            .||.||:.|.|.:. .|.:|::.:.:.|....|||.::.........||..:.|           
Zfish   198 IIPVGATTISIKET-LPTRNYLAIKNLRGEYYLNGHWVIDLSRAASIAGTVLHYQRGREGEKSPE 261

  Fly   995 --TGSSSVVEQVNTTYSWKLSRDLIVQIISLDVSPSKRQDTVLLSYSYTIDKPPDYEAEVEIYRW 1057
              ||.....|            .|::::|:.:|                 ::..|||        
Zfish   262 MITGRGPTTE------------PLVIELITQEV-----------------NEGVDYE-------- 289

  Fly  1058 EMQAPSNCDSLCEGRSHRLPACISTTQGVKVAPQFCDKSAMPKIDDRACNTDCRLNLTVTSISEC 1122
                            :.||      .|                                     
Zfish   290 ----------------YYLP------NG------------------------------------- 295

  Fly  1123 SAACGELGTREKTYACVQTFTNMQRSNIVDMSYCKLKFDVAYHEECREGCWVLSEWSTCSKSCGT 1187
                   |:.|..|                                    |....||.|||.||:
Zfish   296 -------GSTEGYY------------------------------------WSYGSWSACSKECGS 317

  Fly  1188 GSQQREAHCYLHNSRVSDDLCNPRTKPHLNTLIGICNTESCP-------TY-------TKSPNA- 1237
            |.|.|...|...:...||.||....:|..|.   .||.:.||       .|       |::|.. 
Zfish   318 GYQSRLVFCTFEDEAYSDYLCASLPRPLSNR---TCNEQQCPQTRRMAYVYEAQLWRPTETPRVY 379

  Fly  1238 LAVSNWVIGEWGECNEWCE---KTRSVSC-SHPYGIGCGSRKPKD-----------------VRK 1281
            :.|.:|..|||..|...|.   :.|.|.| ||.   ..|||..:|                 ::|
Zfish   380 VQVYSWTAGEWSPCPVTCGGGLQARRVECMSHD---STGSRLVEDSQCTAYTPRPLSQQNCNMQK 441

  Fly  1282 CCHIKYTSDWTDCSVQCGEGVKRKKQSCTRVYKPDVPGTRKRRVYVDESYCISRKVHRPKLR-TT 1345
            |......| |:.|||.||.|.:.:...|.        |:....|   |.|....:...|:.: ..
Zfish   442 CAQYSIYS-WSQCSVTCGSGKQTRDVVCI--------GSDGASV---EDYACGNQPKPPREQICE 494

  Fly  1346 TKSCRINCKWNASDWRRCPADCSEEYQTRDVRCESFQGDGVEDKHCDAKKRPSKRRICN--NCVR 1408
            ...||....|:..||..|...|....:.|.|.|...|.:....:.|..|.:|.....||  .|.|
Zfish   495 MPMCRSPIAWHIGDWGLCSKSCGSGLRERQVICSDRQRNLYRAEECQGKPKPPTVESCNAQPCYR 559

  Fly  1409 RQSRVISQCNCEGVEKR-RDFCFNSHKGRIACP-TRARVERHSCTPPPHCRRRS----AIGSSIS 1467
            .| .|.|..:..|.:.. ..|...|....:..| ..|....|.....|||.:..    ..|.:.:
Zfish   560 PQ-EVPSMQDPTGHDNTLHGFMPYSEDPLLEIPQNNAAHSPHGTALTPHCSQTQYGCCPDGRTPA 623

  Fly  1468 SRPRGTGVSSSRSLNSIGGSRNRGTPRSCAD-LKEMHGYNKDGNYQLEVRSRMVHIYCHGMNSRT 1531
            |.|:..|....:...|...||.    ..|.| :....|.|.:|         ....:.|..:|..
Zfish   624 SGPQHQGCPQDQGQPSCTWSRY----GCCHDGVTVAQGQNMEG---------CPDAWTHWSSSSD 675

  Fly  1532 PQEYVNVD-PQENYSIYYE-----------------YRTKQTNSC-------PPESRGHEYYNDQ 1571
            ......|| ....|...|:                 ..|:::.||       |.:.....:|.|:
Zfish   676 TVPSAPVDCHSSTYGCCYDGVTAASGTHGEGCSNPPSNTQRSLSCDLPNTVGPCDQWTSRFYFDR 740

  Fly  1572 NSGR-THF 1578
            ::.| .||
Zfish   741 SASRCLHF 748

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdamTS-ANP_996218.1 Pep_M12B_propep <295..394 CDD:460254
ZnMc_ADAMTS_like 455..655 CDD:239801
ADAMTS_CR_2 671..740 CDD:465496
TSP1 754..806 CDD:214559 23/53 (43%)
ADAMTS_CR_3 815..911 CDD:437068 32/96 (33%)
TSP1 1172..1229 CDD:214559 20/56 (36%)
TSP1_ADAMTS 1243..1282 CDD:465950 15/59 (25%)
TSP1_ADAMTS 1355..1405 CDD:465950 14/51 (27%)
GON 1493..1687 CDD:462559 20/113 (18%)
paplnaXP_005169942.1 TSP1 24..75 CDD:214559 23/53 (43%)
ADAMTS_CR_3 80..177 CDD:437068 35/100 (35%)
ADAMTS_spacer1 181..293 CDD:461796 28/175 (16%)
TSP1_ADAMTS 303..355 CDD:465950 20/54 (37%)
TSP1_ADAMTS 385..442 CDD:465950 15/59 (25%)
TSP1_ADAMTS 450..498 CDD:465950 13/58 (22%)
TSP1_ADAMTS 504..557 CDD:465950 14/52 (27%)
Kunitz_papilin 720..770 CDD:438678 7/29 (24%)
Ig_3 839..906 CDD:464046
Ig 959..1034 CDD:472250
Ig strand B 963..967 CDD:409353
Ig strand C 979..983 CDD:409353
Ig strand E 1000..1004 CDD:409353
Ig strand F 1014..1019 CDD:409353
Ig strand G 1027..1030 CDD:409353
Ig 1039..1121 CDD:472250
Ig strand B 1055..1059 CDD:409353
Ig strand C 1067..1071 CDD:409353
Ig strand E 1090..1094 CDD:409353
Ig strand F 1104..1109 CDD:409353
Ig strand G 1115..1118 CDD:409353
PLAC 1142..1173 CDD:462560
Blue background indicates that the domain is not in the aligned region.

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