DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AdamTS-A and sona

DIOPT Version :10

Sequence 1:NP_996218.1 Gene:AdamTS-A / 41887 FlyBaseID:FBgn0286071 Length:1688 Species:Drosophila melanogaster
Sequence 2:NP_001137746.1 Gene:sona / 37762 FlyBaseID:FBgn0034903 Length:1102 Species:Drosophila melanogaster


Alignment Length:678 Identity:159/678 - (23%)
Similarity:242/678 - (35%) Gaps:210/678 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 MFHLGLRSA--HKGQEELPQSTHPLAN---------SPPATPATLHPRRLDNDTSTD-------H 222
            :||:....|  |   .||.|..|...|         ..|...|.|.|..:..|.|.:       |
  Fly    37 VFHVDTHDAVPH---YELVQLQHHENNHNRRRRSIGKGPKVNAALPPHHVKKDLSKNAYYSELKH 98

  Fly   223 EP-PDGLDDLDEEEHSAFVMPTKVYNYSLSEADLIYESKRNSDINSFLKESASAFAMTGTYRNMS 286
            |. ..|.:.|...|.||.    |.:|.|.|..        ...:|..|:      |..|.::...
  Fly    99 EALASGGNHLFAPEVSAI----KSHNVSFSAF--------GQHLNLSLR------ATQGLFKGAP 145

  Fly   287 NEI--W----DP------------HPQYNLNVFGRQLHLVLRQDASFVHNH----------SMTH 323
            :::  |    :|            |.|:..|..|..........|..:..|          |:.|
  Fly   146 HQLRMWTVGSEPNATHGLDLQEIVHEQHTSNDVGEVFQDEKNMAAILMRRHMETGDLIMEGSIGH 210

  Fly   324 IRILK--EGEEHPGPE--------TEAEAEQRHLGCFYSGYVEDDPHSMVSVSLCGGMTGYIKTS 378
            ..::|  ..|..|.||        .||.|.:..|..|  .::|.|.                   
  Fly   211 DLVIKPLPHELSPNPEESHHIIYKREASAAEGQLSDF--AFMEPDD------------------- 254

  Fly   379 FGALLIQPVNRTSSDEVLHRVFRKSQRNARHAVSKFELGLDDFMSKLEQVQEEE--------QKS 435
               ||        :.|.|.|:.|:.:|:.|.|.|.     .||    |.:.:|:        |.:
  Fly   255 ---LL--------ASEKLERLQRRQRRSRRSAPSS-----PDF----EDLNDEDEGALDGEPQVA 299

  Fly   436 KSRKLNRKKRHYADVDNQVYTLEVLIAVDNSMKQFHGED---LQPYILILMSIVSSIFADASIGN 497
            :||..:|::..|.     :|. |||:.||....:.||.|   ::.|.:...:.|...:.... |.
  Fly   300 ESRTRSRRQAPYI-----IYP-EVLVIVDYDGYRLHGGDNLQVKRYFISFWNGVDLRYRLLK-GP 357

  Fly   498 SIRILLVRLI------SLPNIN---------DQTHSSNEMLKHFCQFINQSGYER-----DTAML 542
            .|||.:..:|      :.|.:.         |...:..:|.|:..:       ||     |.|:.
  Fly   358 RIRISIAGIIISRGRDATPYLERNRVGRDAIDSAAALTDMGKYLFR-------ERRLPVYDIAVA 415

  Fly   543 ITREPIC--GSVPGKICH--MLGLAELGTVC-------SSSSCSIVQDT-GLPTAFTMAHELGHI 595
            ||:..:|  .|..|: |:  ..|.|.:|..|       ..:|.:|::|| |.......|||:||:
  Fly   416 ITKLDMCRRTSAYGE-CNRGTAGFAYVGGACVVNKRLEKVNSVAIIEDTGGFSGIIVAAHEVGHL 479

  Fly   596 LNMNHDDD-----------DKCMPYVTRQNNNKVLHIMSSVMGIHMHPWSWSKCSRHFVSEFLEK 649
            |...||..           .:|     |..:.   :|||.:.... ..:.||.|:......||..
  Fly   480 LGAVHDGSPPPSYLGGPGAQRC-----RWEDG---YIMSDLRHTE-RGFRWSACTVQSFHHFLNG 535

  Fly   650 TDKSCLETSVGAHIPYGTERLPGEIYSLDAQCQLSFGNDFGY-CPTDEE-CKRLWC-NRTSGNSN 711
            ...:||..:.......| ..|||.:.||||||:...|.   | |..||. |.:|:| :..:|   
  Fly   536 DTATCLHNAPHEDSALG-RSLPGTLLSLDAQCRRDRGT---YACFKDERVCAQLFCFDAQTG--- 593

  Fly   712 EQCASSNLPWADGTPCGSSGHWCQRGKC 739
             .|.:.. |.|:|:.|| :|:.|..|:|
  Fly   594 -YCVAYR-PAAEGSACG-NGYHCLDGRC 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdamTS-ANP_996218.1 Pep_M12B_propep <295..394 CDD:460254 21/118 (18%)
ZnMc_ADAMTS_like 455..655 CDD:239801 57/245 (23%)
ADAMTS_CR_2 671..740 CDD:465496 27/72 (38%)
TSP1 754..806 CDD:214559
ADAMTS_CR_3 815..911 CDD:437068
TSP1 1172..1229 CDD:214559
TSP1_ADAMTS 1243..1282 CDD:465950
TSP1_ADAMTS 1355..1405 CDD:465950
GON 1493..1687 CDD:462559
sonaNP_001137746.1 ZnMc_salivary_gland_MPs 313..542 CDD:239800 58/247 (23%)
ADAMTS_CR_2 556..619 CDD:465496 27/72 (38%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.