DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AdamTS-A and loh

DIOPT Version :9

Sequence 1:NP_996218.1 Gene:AdamTS-A / 41887 FlyBaseID:FBgn0286071 Length:1688 Species:Drosophila melanogaster
Sequence 2:NP_609406.2 Gene:loh / 34435 FlyBaseID:FBgn0032252 Length:880 Species:Drosophila melanogaster


Alignment Length:934 Identity:206/934 - (22%)
Similarity:318/934 - (34%) Gaps:260/934 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   595 ILNMNHDDDDKCMPYVTRQNNNKVLHIMSSVMGIHMHPWSWSKCSRHFVSEFLEKTDKSCLETSV 659
            :.|:.|...|...|  .::.|||..::.:..                 .|:...|:|:..|::|.
  Fly    60 LANLWHTRKDLSSP--KQKPNNKEEYLENET-----------------TSKISNKSDEKVLKSST 105

  Fly   660 GAHIPYGTERLPGEIYSLDAQCQLSFGNDFGYCPTDEECKRLWCNRT-----------SGN---- 709
                          |.||:|.           .|:....|.:....|           |||    
  Fly   106 --------------IISLNAT-----------NPSTSTFKSVLETTTLPSVTTKDLFESGNVATT 145

  Fly   710 ----SNEQCASSNLPWADGTPCGSSGHWCQRGKCVSNKHGYGRQVNGGWGPWTPFTPCSLTCGGG 770
                ..|:..||..|..:.|...|.       |.....:.|.|     |..|:.::.||.:||||
  Fly   146 RQTPKVEEVFSSPNPPQEATSSTSK-------KAKKKVYPYPR-----WDKWSDWSSCSRSCGGG 198

  Fly   771 VQESRREC-------NQPVPENGGKYCTGSRKKYRSCNTHQCPPGSMDPREQQCYAMNGRNMNIP 828
            |:...|:|       |..:..|.   |.|..|:|:.||...|...|.|.|..||.|.|.:..:  
  Fly   199 VKYQVRKCINRNLLTNNQLTSNA---CVGYFKRYQLCNDVPCDEQSPDFRASQCSAYNDKEFH-- 258

  Fly   829 GVNPDTKWVPKYEKDA-CKLFCRMDMKVTYFMLKSMVTDGTSCA--VDSFDK-------CVNGIC 883
              ....:|.|..:.|| |:|.|......::..|...|.|||.|.  .:.|..       ||:|.|
  Fly   259 --GHRYRWEPYVKDDAECELNCMPFGMKSFATLNESVIDGTPCGHPAEYFRSQFWERAVCVDGAC 321

  Fly   884 RPAGCDNELNSIAKLDKCGVCEGRNDTCHEVTGNLLVSNLLGLNDGNEPNKTLYYVTRIPKGASN 948
            :......|::.:........|.|.  .|..||| :...|.|       |.....:||.:|.||||
  Fly   322 KAVQASGEIDGLYAHSGSVSCGGL--LCRPVTG-IFTRNPL-------PEHAYIHVTTLPVGASN 376

  Fly   949 IIITQRGYPDQNFIVLTDDRDNELLNGKFLKTYPLKFVYAGVTMQYTGSSSVVEQVNTTYSWKLS 1013
            |.||:. ....|.:||....:..:.||:...:....:...|....|..... .|..|....|..|
  Fly   377 ISITEL-KNSINLLVLRTSNELAIFNGENTVSESGSYEAVGAVFDYHRIDG-AEDSNGVTEWITS 439

  Fly  1014 RDLIVQIISLDVSPSKRQDTVLLSYSY---TIDKPPDYEAEVE---------------------- 1053
            ...|...:.|.|. :|..:...:.|.|   .:.:..:.|..:|                      
  Fly   440 IGPIRDSLQLMVF-TKSANNTGVKYEYMLPIVSESEENEMSLESSDGLLRSGMEDTSSSSSSRAG 503

  Fly  1054 ---IYRWEMQAPSNCDSLCEGRSHR-LPACISTTQGVKVAPQFCDKSAMPKIDDRA--CNTD-CR 1111
               |:.|::...|:|...|.|.:.. :..||........:.:.|..|..|.:::..  |||. |.
  Fly   504 RKRIFNWKVIGFSSCTKSCGGGTQTPIIRCIRKNPLRYYSQRRCTHSVKPVLNENLLHCNTQPCP 568

  Fly  1112 LNLTVTSISECSAACGELGTREKTYACVQTFTNMQRSNI---VDMSYCKLKFDVAYHEECR---- 1169
            .........||..:... |.|.:..:|||...    |.:   ||.:.| ::......::|.    
  Fly   569 AYWRFDDWGECRCSSSG-GLRRREVSCVQELA----SGLVIHVDKAAC-MEDQPPMQKQCECPKN 627

  Fly  1170 ---------------------------------EGCWVLSEWST-CSKSCGTGSQQREAHCYLHN 1200
                                             ...|::|:|:. ||.:||:|.:.|...|  ..
  Fly   628 RRRNLSRYRLSGPSESSSNSSQVKRSKIDGSDATAIWLVSDWNQYCSVTCGSGVEYRTVFC--DR 690

  Fly  1201 SRVSDDLCNPRTKPHLNTLIGICNTESCPTYTKSPNALAVSNWVIGEWGECNEWC---EKTRSVS 1262
            |:..:..|:|.|.|....   .|...:|          .:.:|..|.|..||..|   .:||.|.
  Fly   691 SKAGEQRCDPSTTPESRR---PCEKPAC----------ELGDWFTGPWSSCNGDCFDLTRTREVL 742

  Fly  1263 CSHPYGIGCGSR-----KPKDVRKCCH--IKYT------SDWTDCSVQCGEGVKRKKQSCTRVYK 1314
            |.....|...|.     ||:.|.||.|  ::|.      |||::|:..||.|.:|:...|...  
  Fly   743 CIRSQLITEHSECTPELKPQSVEKCSHEEVEYCAARWHYSDWSECTKPCGGGTQRRSVRCLEY-- 805

  Fly  1315 PDVPGTRKRRVYVDESYCISRKVHRPKLRTTTKSCRI--------------------NCKWNASD 1359
             |:    |.....:.::|  |..:|..:   .::|.:                    ||:| ||.
  Fly   806 -DI----KMNALRESTHC--RYTNREPI---YRNCNVQACAEVPKTEVTPVCADKFSNCQW-ASQ 859

  Fly  1360 WRRCPADCSEEYQTRDVRCESFQG 1383
            .:.    ||.:|. ||..|.|..|
  Fly   860 AKL----CSYDYY-RDNCCFSCTG 878

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdamTS-ANP_996218.1 Pep_M12B_propep 286..394 CDD:279848
ZnMc_ADAMTS_like 455..655 CDD:239801 10/59 (17%)
Reprolysin 457..655 CDD:279729 10/59 (17%)
Salp15 <696..745 CDD:288931 12/67 (18%)
TSP1 754..806 CDD:214559 19/58 (33%)
ADAM_spacer1 937..1042 CDD:283607 27/107 (25%)
TSP1 1172..1229 CDD:214559 16/57 (28%)
GON 1495..1687 CDD:285848
lohNP_609406.2 TSP1 182..238 CDD:214559 19/58 (33%)
ADAM_spacer1 348..468 CDD:283607 33/130 (25%)
TSP1 667..716 CDD:214559 16/63 (25%)
TSP1 779..835 CDD:214559 15/67 (22%)
PLAC 847..877 CDD:285849 12/35 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456950
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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