DRSC/TRiP Functional Genomics Resources

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Protein Alignment AdamTS-A and adamtsl3

DIOPT Version :9

Sequence 1:NP_996218.1 Gene:AdamTS-A / 41887 FlyBaseID:FBgn0286071 Length:1688 Species:Drosophila melanogaster
Sequence 2:XP_012814972.2 Gene:adamtsl3 / 100493011 XenbaseID:XB-GENE-923351 Length:1777 Species:Xenopus tropicalis


Alignment Length:1081 Identity:259/1081 - (23%)
Similarity:389/1081 - (35%) Gaps:321/1081 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   751 NGGWGPWTPFTPCSLTCGGGVQESRRECNQPVPENGGKYCTGSRKKYRSCNTHQCPPGSMDPREQ 815
            :.||..|..::.||.|||||...|.|.|      ..|:.|.|...:|::|:.:.||....|.|.|
 Frog    86 DNGWDAWGTWSDCSRTCGGGASYSLRRC------LNGRSCEGRNIRYKTCSNNDCPSDVGDFRAQ 144

  Fly   816 QCYAMNGRNMNIPGVNPDTK-------WVPKYEKDA---CKLFCRMDMKVTYFMLKSMVTDGTSC 870
            ||.|.|           |.|       |.|.| .||   |.|.|:...|.....|...|.|||.|
 Frog   145 QCSAHN-----------DVKYQGQYYEWQPVY-NDASAPCALKCQAVGKNLVVELAPKVLDGTRC 197

  Fly   871 AVDSFDKCVNGICRPAGCDNELNSIAKLDKCGVCEGRNDTCHEVTGNLLVSNLLGLNDGNEPNKT 935
            ..||.|.|::|||:..|||.:|.|.||.|.||||.|...||..|.|... |:|       .|.|.
 Frog   198 NTDSPDMCISGICQAVGCDRQLGSNAKEDNCGVCAGDGSTCRLVRGQTR-SHL-------SPEKR 254

  Fly   936 LYYVTRIPKGASNIIITQRGYPDQNFIVLTDDRDNELLNGKFLKTYPLKFVYAGVTMQY-TGSSS 999
            ...:..:|.|:.::.||.:| |...||   :.:..:..:|:...|.|..:|....|::: .||..
 Frog   255 EETIIAVPHGSRSVRITVKG-PAHVFI---ESKTLQGESGEHSFTSPGSYVIENTTVEFQRGSER 315

  Fly  1000 VVEQVNTTYSWKLSRDLIVQIISLDVSPSKRQDTVLLSYSYTIDKPPDYEAEVEIYRWEMQAPSN 1064
            .:.::    ...|..|.|::|     ..:..:|:::..|.|   :|..::       |.......
 Frog   316 EILKI----PGPLRADFIIKI-----KYAAPKDSIVQFYFY---QPISHQ-------WRQTDFFP 361

  Fly  1065 CDSLCEGRSHRLPA--CISTTQGVKVAPQFC-----DKSAMPKIDDRACNTD-CRLNLTVTSI-- 1119
            |...| |..::|.:  |:.......|...:|     :|...||:  :.||.: |..:.....|  
 Frog   362 CTVTC-GGGYQLNSAECVDIRLNRTVNDHYCHYYPENKKPKPKL--KECNMEPCPSSDGFKEIMP 423

  Fly  1120 ---------------SECSAACGELGTREKTYACVQTFTNMQRSNIVD-----------MSYCKL 1158
                           :.||.:||. |.:.::..||:...:.:...:.:           |..|.|
 Frog   424 YDHFQPLPRWEHNPWTACSVSCGG-GIQRRSIVCVEETMHGEILQVEEWKCMYAPKPTIMQTCNL 487

  Fly  1159 KFDVAYHEECREGCWVLSEWSTCSKSCGTGSQQREAHCYLHNSRVSDDLCNPRTKPHLNTLIGIC 1223
             ||      |.:  |:..|||.|:.:||.|.:.|...|..|..:.:.. |||:.|||:.      
 Frog   488 -FD------CPK--WMAMEWSQCTVTCGRGLRYRVVLCNDHRGQHTGG-CNPQLKPHIK------ 536

  Fly  1224 NTESC-------------PTYTKSP------------NALAVSNWVIGEWGECNEWCEK---TRS 1260
              |.|             |...|.|            .|.....::...|..|:..|.:   .|.
 Frog   537 --EECVVPVPCFKPRERFPVEAKHPWLKQAQELEETKTASDEPTFIPEAWSPCSVSCGRGMQVRQ 599

  Fly  1261 VSCSHPYGI----------GCGSRKPKDVRKCCHI--------KYTS------------DW---- 1291
            |.|......          .|...|| |..:.|::        ..||            ||    
 Frog   600 VKCRILLSFTQTELELPDEECEEEKP-DTERACYLLPCEGDPGTQTSEHLPHDIESPLYDWEYIG 663

  Fly  1292 -TDCSVQCGEGVKRKKQSCTRVYKPDVPGTRKRRVYVDESYCISRKVHRPKLRTTTKSCRIN-C- 1353
             |.||..|..|.:.....|..:         :.:..|:.|.|.| .|..|.:   |::|... | 
 Frog   664 FTSCSSSCSGGRQEAIAVCLNM---------QTKQSVNNSLCDS-SVRPPAM---TRACNTKLCP 715

  Fly  1354 -KWNASDWRRCPADCSEEYQTRDVRCESFQGDG-VEDKHCDAKKRPSKRRICN--NCVRR-QSRV 1413
             :||...|.||.|.|....|||||.|.|....| ..::.|.|:| ||..:.||  :|... .:..
 Frog   716 PRWNTGSWSRCSATCGVGIQTRDVYCSSVSESGNNSEQECGAEK-PSAIQPCNQIDCPPAWHTED 779

  Fly  1414 ISQCN--C-EGVEKRRDFCF---------------------NSHK--GRIACPTRARV-ERHSCT 1451
            ..||:  | .||:.||..|.                     .|||  |:..||.:... |...|:
 Frog   780 WQQCSRTCGGGVQIRRVTCKQLLADGSFLKLGDELCQMQKPGSHKPCGKADCPPQLTTGEWSKCS 844

  Fly  1452 PPPHC----RRRSAIGSSISSRPRGTGVSSSRSLNSIGGSRNRGTP-----RSC----ADLKEMH 1503
              ..|    :||..|...|:::..         |..|..|...|.|     |||    ...|: |
 Frog   845 --TKCSVGIQRRKMICLKITAKGH---------LIPINDSHCHGLPSPALVRSCHMGVCQTKQ-H 897

  Fly  1504 GYNKDGNYQL-EVRSRMVHIYCHGMNSRTPQEYVNVDPQENYSI----YYEYRTKQTNSCPPESR 1563
            ..|::.:.:. |:.|      .|.:..:|.||     .:.|::|    |...:|.....||    
 Frog   898 NPNRETSPESPEILS------IHRVYIQTRQE-----KRINFTIGSRAYLLPKTSVVIKCP---- 947

  Fly  1564 GHEYYNDQNSGRTHFRKLRLNITDLRIMDNDFKFADSRGL------------AQKLG-------S 1609
                          .|.::.::......|...|::...|:            ||.:|       |
 Frog   948 --------------VRGIQKSLIKWEKDDQPLKYSKKLGVTKSGSLKIHNLEAQDIGVYKCIANS 998

  Fly  1610 AGDCY--------NRIGQCPQGDFSINMKDTDFSIRPGTVW 1642
            |.:.:        ||:.:.|..:     ||.:.:...|..|
 Frog   999 AHETFVLKLIGRDNRLLEAPSFE-----KDHNEANNLGAKW 1034

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdamTS-ANP_996218.1 Pep_M12B_propep 286..394 CDD:279848
ZnMc_ADAMTS_like 455..655 CDD:239801
Reprolysin 457..655 CDD:279729
Salp15 <696..745 CDD:288931
TSP1 754..806 CDD:214559 17/51 (33%)
ADAM_spacer1 937..1042 CDD:283607 22/105 (21%)
TSP1 1172..1229 CDD:214559 19/69 (28%)
GON 1495..1687 CDD:285848 33/184 (18%)
adamtsl3XP_012814972.2 TSP1 89..135 CDD:214559 17/51 (33%)
TSP1_ADAMTS 354..412 CDD:408800 13/60 (22%)
TSP1_ADAMTS 433..490 CDD:408800 12/64 (19%)
TSP1_ADAMTS 493..545 CDD:408800 19/60 (32%)
TSP1_ADAMTS 579..636 CDD:408800 11/57 (19%)
TSP1_ADAMTS 718..771 CDD:408800 22/53 (42%)
TSP1_ADAMTS 775..831 CDD:408800 12/55 (22%)
TSP1_ADAMTS 837..892 CDD:408800 15/65 (23%)
Ig 943..999 CDD:416386 9/73 (12%)
Ig strand C 955..960 CDD:409353 0/4 (0%)
Ig strand C' 962..965 CDD:409353 1/2 (50%)
Ig strand D 970..974 CDD:409353 1/3 (33%)
Ig strand E 977..983 CDD:409353 0/5 (0%)
Ig strand F 990..998 CDD:409353 1/7 (14%)
Ig 1216..1285 CDD:416386
Ig strand B 1216..1225 CDD:409353
Ig strand C 1231..1235 CDD:409353
Ig strand C' 1238..1240 CDD:409353
Ig strand D 1248..1252 CDD:409353
Ig strand E 1253..1258 CDD:409353
Ig strand F 1266..1274 CDD:409353
Ig 1318..1382 CDD:416386
Ig strand B 1322..1329 CDD:409353
Ig strand C 1337..1341 CDD:409353
Ig strand D 1353..1356 CDD:409353
Ig strand E 1357..1362 CDD:409353
Ig strand F 1370..1378 CDD:409353
Ig_3 1416..1489 CDD:404760
Ig strand C 1443..1447 CDD:409353
Ig strand E 1468..1472 CDD:409353
Ig strand F 1482..1487 CDD:409353
TSP1_ADAMTS 1508..1562 CDD:408800
TSP1_ADAMTS 1566..1623 CDD:408800
TSP1_ADAMTS 1626..1682 CDD:408800
TSP1_ADAMTS 1686..1740 CDD:408800
PLAC 1745..1774 CDD:400844
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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