DRSC/TRiP Functional Genomics Resources

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Protein Alignment AdamTS-A and adamts4

DIOPT Version :9

Sequence 1:NP_996218.1 Gene:AdamTS-A / 41887 FlyBaseID:FBgn0286071 Length:1688 Species:Drosophila melanogaster
Sequence 2:XP_004919795.1 Gene:adamts4 / 100487641 XenbaseID:XB-GENE-996659 Length:852 Species:Xenopus tropicalis


Alignment Length:873 Identity:284/873 - (32%)
Similarity:420/873 - (48%) Gaps:112/873 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   254 DLIYESKRNSDINSFLKESASAFAMTGTYRNMSNE-IWDPHPQYNLNVFGRQLHLVLRQDASFVH 317
            ::::..:.||   ||.:|...       :...:|| ..|.|..:....||.:|.|.:.:|.||: 
 Frog    41 EIVFPERLNS---SFRQEHPQ-------WPGSANEPPSDGHLIFRFRAFGEELILDMERDPSFL- 94

  Fly   318 NHSMTHIRILKEGEEHPGPETEAEAE-QRHLGCFYSGYVEDDPHSMVSVSLCG-GMTGYIKTSFG 380
            :..:|        .::.|...:::|: ....|.:::|.|..||.|:.:|:..| .:.|.::....
 Frog    95 SEDLT--------VQYLGRNRQSDADGLSEPGSYFTGAVNSDPESIAAVNYNGASLVGVLQYRGA 151

  Fly   381 ALLIQPVNRTSSDEV----LHRVFRKSQRNARHAVSKFELGLDDFMSKLEQVQEEEQKSKSRKLN 441
            ...|||:.....:.|    .|.:.||....:...:.  .:|...........:.::...|||..:
 Frog   152 EFHIQPLEGGGPNSVEGVGAHVIRRKVPDRSNGPMC--NVGTQGEKKGSRDAEPKDNTVKSRAAS 214

  Fly   442 RKKRHYADVDNQVYTLEVLIAVDNSMKQFHGEDLQPYILILMSIVSSIFADASIGNSIRILLVRL 506
            .:.:.:|.|...|   |.|:..|.:|..|||.||:.|:|.:::..:..|...|:.|.:.:::.||
 Frog   215 TRSKRFASVPRYV---ETLVVADETMADFHGADLKRYLLTVLAASAKFFRHPSLKNPVNVVVTRL 276

  Fly   507 ISLPNIN--------DQTHSSNEMLKHFCQFINQSGYER---------DTAMLITREPICGSVPG 554
            :.:...:        ..|.::.|||::||::  |.|..:         |||:|.||:.:||.   
 Frog   277 VVIGKADKAQKYGGLKMTTNAAEMLRNFCEW--QKGLNKQNDSDSEHFDTAILFTRQNLCGV--- 336

  Fly   555 KICHMLGLAELGTVCS-SSSCSIVQDTGLPTAFTMAHELGHILNMNHDDDDKCMPYVTRQNNNKV 618
            ..|..||:|::||||. |.|||||:|.||.:|||.||||||:.||.||:...|:......:|.: 
 Frog   337 STCDTLGMADVGTVCDPSRSCSIVEDDGLQSAFTAAHELGHVFNMLHDNSKPCVELNRPSSNTR- 400

  Fly   619 LHIMSSVMGIHMHPWSWSKCSRHFVSEFLEKTDKSCL----ETSVGAHIPYGTERLPGEIYSLDA 679
             |:|:.||........||.||..|:::||:..:..||    .|.:...:|:     ||..|..|.
 Frog   401 -HMMAPVMSFVDPEELWSPCSAKFITDFLDNGNGHCLLDKPRTPLRLPVPF-----PGNDYDADR 459

  Fly   680 QCQLSFGNDFGYCPT-DEECKRLWC-NRTSGNSNEQCASSNLPWADGTPCGSSGHWCQRGKCVS- 741
            ||||:||.|..:||. ...|..||| .:..|:.  .|.:.:.||||||.|| .|..|..|:|:| 
 Frog   460 QCQLTFGPDSRHCPNLHTPCSSLWCTGKIDGHF--MCQTKHFPWADGTSCG-VGKTCMNGRCISK 521

  Fly   742 -NKHGYGRQVNGGWGPWTPFTPCSLTCGGGVQESRRECNQPVPENGGKYCTGSRKKYRSCNTHQC 805
             ....:...||||||||.|:..||.|||||||.|.||||:|||.||||||.|.|.:||||||..|
 Frog   522 VEMKAFNTPVNGGWGPWGPYGQCSRTCGGGVQFSHRECNKPVPRNGGKYCEGKRTQYRSCNTQMC 586

  Fly   806 PPG-SMDPREQQCYAMNGRNMNIPGVNPDTKWVPKY----EKDACKLFCRMDMKVTYFMLKSMVT 865
            ..| ::..|||||.|.|.|............|||:|    |||.|||.|:......|::|:..|.
 Frog   587 ALGNALTYREQQCAAYNHRTDMFKTFPSPMDWVPRYNGIAEKDRCKLTCQSRPLGYYYVLEPRVA 651

  Fly   866 DGTSCAVDSFDKCVNGICRPAGCDNELNSIAKLDKCGVCEGRNDTCHEVTGNLLVSNLLGLNDGN 930
            |||.|:.||...||.|.|..||||..:.|..|.|||.||.|...||.:..|:.           .
 Frog   652 DGTPCSPDSTSVCVQGRCVHAGCDRIIGSKKKFDKCMVCGGDGSTCTKNYGSF-----------T 705

  Fly   931 EPNKTLYYVTRIPKGASNIIITQR----GYPDQNFIVLTDDRDNELLNGKFLKTYPLKF---VYA 988
            :|......|..||.||:||:|.|.    ...|..::.|.....:..|||.:: ..|.:.   :..
 Frog   706 KPRYGYNNVVTIPAGATNILIRQNSGSSSTSDGVYLALKRQDGSYALNGNYI-LVPSELDVGIGG 769

  Fly   989 GVTMQYTGSSSVVEQVNTTYSWKLSRDLIVQIISLDVSPSKRQDTVLLSYSYTIDKP-----PDY 1048
            |.:::|:|::..||.:  .....|...|.||  :|.||.   |....|.|::.:.||     |..
 Frog   770 GASVRYSGATKAVETI--VGRGPLKEPLTVQ--ALVVSD---QRVPRLKYTFFVPKPTVRSSPPK 827

  Fly  1049 EAEVEIYRWEMQAPSNCDSLCEGR-SHR 1075
            :|..|   |..:.....|.|...| ||:
 Frog   828 KATDE---WSKRRAQIMDILRRTRNSHK 852

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdamTS-ANP_996218.1 Pep_M12B_propep 286..394 CDD:279848 26/110 (24%)
ZnMc_ADAMTS_like 455..655 CDD:239801 75/217 (35%)
Reprolysin 457..655 CDD:279729 75/215 (35%)
Salp15 <696..745 CDD:288931 19/51 (37%)
TSP1 754..806 CDD:214559 36/51 (71%)
ADAM_spacer1 937..1042 CDD:283607 30/111 (27%)
TSP1 1172..1229 CDD:214559
GON 1495..1687 CDD:285848
adamts4XP_004919795.1 Pep_M12B_propep 41..174 CDD:366707 33/151 (22%)
ZnMc_ADAMTS_like 225..437 CDD:239801 77/221 (35%)
ADAM_CR_2 451..519 CDD:375321 30/70 (43%)
ADAM_CR 502..671 CDD:387620 85/169 (50%)
TSP1 543..586 CDD:214559 31/42 (74%)
ADAM_spacer1 702..817 CDD:368694 32/133 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 89 1.000 Domainoid score I7711
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D125522at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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