DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Act88F and ARP9

DIOPT Version :9

Sequence 1:NP_524367.1 Gene:Act88F / 41885 FlyBaseID:FBgn0000047 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_013747.1 Gene:ARP9 / 855049 SGDID:S000004636 Length:467 Species:Saccharomyces cerevisiae


Alignment Length:478 Identity:85/478 - (17%)
Similarity:158/478 - (33%) Gaps:180/478 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 PRHQGVMVGMG----------------------QKDSYVGDEAQSKRGILTLKYPIEHGIITNWD 81
            ||.|..:|..|                      |..||. ..:.:|.....|..||::|.|.:..
Yeast    14 PRSQTTLVQFGLNEETFTVPELEIPTQIYRTTRQDGSYT-YHSTNKDNKAELIKPIQNGEIIDIS 77

  Fly    82 DMEKIWHHTFYNELRVAPEEH-----------PVLLTEAPLNPKANREKMTQIMFET------FN 129
            ...:.....|.:.|.....::           |:||.......:::.|.:||.:||:      ..
Yeast    78 AFTQFLRLIFVSILSDRANKNQDAFEAELSNIPLLLITHHSWSQSDLEIITQYVFESLEINNLIQ 142

  Fly   130 SPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFALPHAILRLDLAGRDLTDYLMKIL 194
            .||...|..:::||     ....::|.|...:..:||.:...|.|.:..:.:.|:.:.|.|.|:|
Yeast   143 LPASLAATYSMISL-----QNCCIIDVGTHHTDIIPIVDYAQLDHLVSSIPMGGQSINDSLKKLL 202

  Fly   195 ----TERGYSFTTTAEREIVRDIKEKLCYVALDFEQE--------MATAAASTSLEKSYELPD-- 245
                .::..|...:...|::.|..:||.  :.||..|        :..|...||...:.|:.:  
Yeast   203 PQWDDDQIESLKKSPIFEVLSDDAKKLS--SFDFGNENEDEDEGTLNVAEIITSGRDTREVLEER 265

  Fly   246 -----------------------GQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMK-- 285
                                   |..|.:|.:||              :.|       |:::|  
Yeast   266 ERGQKVKNVKNSDLEFNTFWDEKGNEIKVGKQRF--------------QGC-------NNLIKNI 309

  Fly   286 -----------CDVDIRKDLYANSVLSGGTTMYPGIAD--------------------RMQKEIT 319
                       .|::..|.::.|.::.||||...|..:                    :.::|..
Yeast   310 SNRVGLTLDNIDDINKAKAVWENIIIVGGTTSISGFKEALLGQLLKDHLIIEPEEEKSKREEEAK 374

  Fly   320 ALAPSTIKIK----------------IIAP------------PERKYS-----VWIGGSILAS-- 349
            ::.|:..|.|                :..|            ||.|.|     :::|..|::.  
Yeast   375 SVLPAATKKKSKFMTNSTAFVPTIEYVQCPTVIKLAKYPDYFPEWKKSGYSEIIFLGAQIVSKQI 439

  Fly   350 ----LSTFQQMWISKQEYDESGP 368
                ..||   :|::::|:..||
Yeast   440 FTHPKDTF---YITREKYNMKGP 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act88FNP_524367.1 PTZ00281 1..376 CDD:173506 85/478 (18%)
ARP9NP_013747.1 COG5277 1..467 CDD:227602 85/478 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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