DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act88F and ACTRT3

DIOPT Version :10

Sequence 1:NP_524367.1 Gene:Act88F / 41885 FlyBaseID:FBgn0000047 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_115876.3 Gene:ACTRT3 / 84517 HGNCID:24022 Length:372 Species:Homo sapiens


Alignment Length:368 Identity:183/368 - (49%)
Similarity:263/368 - (71%) Gaps:3/368 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 73
            :||||||||.|||.||...|:.::|:|:||.:.|. ....|..:..|||:||..|..|.:.||:|
Human     8 VVIDNGSGMIKAGVAGCREPQFIYPNIIGRAKGQS-RAAQGGLELCVGDQAQDWRSSLFISYPVE 71

  Fly    74 HGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 138
            .|:||:|:|||.:|.|.:...|::.|.:.|||:||..|||.|||:::|::.||....||.|::||
Human    72 RGLITSWEDMEIMWKHIYDYNLKLKPCDGPVLITEPALNPLANRQQITEMFFEHLGVPAFYMSIQ 136

  Fly   139 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 203
            |||:|:|:|.|||:||:||.||:.:|||:||:.|||.:.:|||||.|||:|||.::...|....:
Human   137 AVLALFAAGFTTGLVLNSGAGVTQSVPIFEGYCLPHGVQQLDLAGLDLTNYLMVLMKNHGIMLLS 201

  Fly   204 TAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 268
            .::|:||.||||..||||:::|:||  |.....|||.|:||||:||.:.::.|.||||||.|..:
Human   202 ASDRKIVEDIKESFCYVAMNYEEEM--AKKPDCLEKVYQLPDGKVIQLHDQLFSCPEALFSPCHM 264

  Fly   269 GMESCGIHETVYNSIMKCDVDIRKDLYANSVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAP 333
            .:|:.||.:..::||||||..:|...::|.:|:||:|.:||:..|:.|:|..:||:...:::|||
Human   265 NLEAPGIDKICFSSIMKCDTGLRNSFFSNIILAGGSTSFPGLDKRLVKDIAKVAPANTAVQVIAP 329

  Fly   334 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 376
            ||||.|||:|||||||||.||.|||:..|:.|.||.|||::||
Human   330 PERKISVWMGGSILASLSAFQDMWITAAEFKEVGPNIVHQRCF 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act88FNP_524367.1 ASKHA_NBD_actin 8..371 CDD:466823 178/361 (49%)
ACTRT3NP_115876.3 ASKHA_NBD_actin_Arp-T1-3 7..363 CDD:466848 176/357 (49%)

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