DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act88F and ARP4

DIOPT Version :10

Sequence 1:NP_524367.1 Gene:Act88F / 41885 FlyBaseID:FBgn0000047 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_564051.1 Gene:ARP4 / 838425 AraportID:AT1G18450 Length:441 Species:Arabidopsis thaliana


Alignment Length:442 Identity:167/442 - (37%)
Similarity:250/442 - (56%) Gaps:76/442 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DDAGALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV----------MVGMGQKDS----- 53
            |:..|:|:|.||..||||:||:|||:|||||::|..  .||          ......:||     
plant     5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAV--DGVEAMDVDVDSTKTNSNSEDSKTESE 67

  Fly    54 --------YVGDEAQS-KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 109
                    |||.:|.| :|..:.:..||:.||:::||.::.||.|.|.:.|.:.|.|||:||.|.
plant    68 KEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEP 132

  Fly   110 PLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFALPH 174
            |||.:..|||..::|||.:..||:::|...||:.:|:||.|.:|:|.|.|.:...|:::|:.|..
plant   133 PLNTQQQREKAAELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGGGSTTISPVHDGYVLQK 197

  Fly   175 AILRLDLAGRDLTDYLMKILTERG------YSF-------------------TTTA-----EREI 209
            |::...|.|..|||.|:|.|..:|      |||                   ||.:     :|.|
plant   198 AVVSSPLGGEFLTDCLLKSLESKGIKIRPRYSFKRKEVRAGEFQVEDVDIPDTTESYKLFCQRMI 262

  Fly   210 VRDIKEKLCYVA-LDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFL----G 269
            |.|||:.:|.|. ..::.:..:...:|    ||||||||.:.||.:||:.|:.:|.||.:    |
plant   263 VGDIKDSICRVPDTPYDDKSYSNIPTT----SYELPDGQTLEIGADRFKVPDVMFNPSIVQTIPG 323

  Fly   270 MESC--------GIHETVYNSIMKCDVDIRKDLYANSVLSGGTTMYPGIADRMQKEITALAPSTI 326
            ||..        |:...|..||.|||||||::||::.:|:|||:....:.:|::|::...:|.:.
plant   324 MEKYAEMIPSVRGLPHMVMESINKCDVDIRRELYSSILLAGGTSSMQQLKERLEKDLIEESPHSA 388

  Fly   327 KIKIIA---PPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKC 375
            ::|::|   ..||::||||||||||||.:|||||.||.||:|.|...:.|||
plant   389 RVKVLASGNTTERRFSVWIGGSILASLGSFQQMWFSKSEYEEHGASYIQRKC 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act88FNP_524367.1 ASKHA_NBD_actin 8..371 CDD:466823 163/432 (38%)
ARP4NP_564051.1 ASKHA_NBD_Arp4_ACTL6-like 4..432 CDD:466846 163/432 (38%)

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