DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Act88F and DIS1

DIOPT Version :9

Sequence 1:NP_524367.1 Gene:Act88F / 41885 FlyBaseID:FBgn0000047 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_172777.1 Gene:DIS1 / 837876 AraportID:AT1G13180 Length:427 Species:Arabidopsis thaliana


Alignment Length:413 Identity:138/413 - (33%)
Similarity:215/413 - (52%) Gaps:54/413 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ALVIDNGSGMCKAGFAGDDAPRAVFPSIVG-----------------RPRHQ-GVMVGMGQKDSY 54
            |:|||||:|..|.||||:..|..:.|::|.                 :.:|. ||...:   |.|
plant     8 AIVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADL---DFY 69

  Fly    55 VGDEAQSK-RGILT--LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
            :||||.:| |...|  |.||||||.:.:||.||:.|....:|.||..||:|..||||:||.|..:
plant    70 IGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPES 134

  Fly   117 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRT------TGIVLDSGDGVSHTVPIYEGFALPHA 175
            ||...:|:|||||.|.:|:|:.:||:| |:|.|      ||:|:|.|||.:|.||:.||:.:...
plant   135 REYTGEILFETFNVPGLYIAVNSVLAL-AAGYTTSKCEMTGVVVDVGDGATHVVPVAEGYVIGSC 198

  Fly   176 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD----FEQEMATAAASTS 236
            |..:.:||:|:|.::.:::.|||.:.......::.|.:||..||...|    |.:.....|....
plant   199 IKSIPIAGKDVTLFIQQLMRERGENIPPEDSFDVARKVKEMYCYTCSDIVKEFNKHDKEPAKYIK 263

  Fly   237 LEKSYELPDGQVIT--IGNERFRCPEALFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDLYANS 298
            ..|..:...|...|  :|.|||..||..|.|.....: :..:...:...|....:|.|:.||.|.
plant   264 QWKGVKPKTGAPYTCDVGYERFLGPEVFFNPEIYSNDFTTTLPAVIDKCIQSAPIDTRRALYKNI 328

  Fly   299 VLSGGTTMYPGIADRMQKEITALAPS----------------TIKIKIIAPPERKYSVWIGGSIL 347
            |||||:||:.....|:|:::..:..:                .:::.:::.|.::::||.|||:|
plant   329 VLSGGSTMFKDFGRRLQRDLKKIVDARVLANNARTGGEITSQPVEVNVVSHPVQRFAVWFGGSVL 393

  Fly   348 ASLSTFQQMWISKQEYDESGPGI 370
            :|...|.....:|:||:|.|..|
plant   394 SSTPEFFASCRTKEEYEEYGASI 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act88FNP_524367.1 PTZ00281 1..376 CDD:173506 138/413 (33%)
DIS1NP_172777.1 PTZ00280 7..426 CDD:240343 138/413 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.