DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Act88F and ACT3

DIOPT Version :9

Sequence 1:NP_524367.1 Gene:Act88F / 41885 FlyBaseID:FBgn0000047 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001326881.1 Gene:ACT3 / 824542 AraportID:AT3G53750 Length:377 Species:Arabidopsis thaliana


Alignment Length:377 Identity:332/377 - (88%)
Similarity:355/377 - (94%) Gaps:1/377 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MCD-DDAGALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
            |.| :|...||.|||:||.|||||||||||||||||||||||.||||||||||:|||||||||||
plant     1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRG 65

  Fly    65 ILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 129
            ||||||||||||:.|||||||||||||||||||||||||:|||||||||||||||||||||||||
plant    66 ILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFN 130

  Fly   130 SPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFALPHAILRLDLAGRDLTDYLMKIL 194
            :|||||||||||||||||||||||||||||||||||||||:||||||||||||||||||.|||||
plant   131 APAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKIL 195

  Fly   195 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCP 259
            |||||||||||||||||||||||||:|||:|||:.||..|:|:||:||||||||||||:||||||
plant   196 TERGYSFTTTAEREIVRDIKEKLCYIALDYEQELETAKTSSSVEKNYELPDGQVITIGSERFRCP 260

  Fly   260 EALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANSVLSGGTTMYPGIADRMQKEITALAPS 324
            |.|:|||.:|||:.|||||.||||||||||||||||.|.||||||||:|||||||.|||||||||
plant   261 EVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPS 325

  Fly   325 TIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 376
            ::|||::|||||||||||||||||||||||||||:|.|||||||.|||||||
plant   326 SMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act88FNP_524367.1 PTZ00281 1..376 CDD:173506 330/375 (88%)
ACT3NP_001326881.1 NBD_sugar-kinase_HSP70_actin 5..377 CDD:418402 328/371 (88%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 681 1.000 Domainoid score I17
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H133745
Inparanoid 1 1.050 697 1.000 Inparanoid score I133
OMA 1 1.010 - - QHG54227
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 1 1.000 - - FOG0000057
OrthoInspector 1 1.000 - - mtm1012
orthoMCL 1 0.900 - - OOG6_100127
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X104
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.780

Return to query results.
Submit another query.