DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act88F and ARP6

DIOPT Version :10

Sequence 1:NP_524367.1 Gene:Act88F / 41885 FlyBaseID:FBgn0000047 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_566861.1 Gene:ARP6 / 823150 AraportID:AT3G33520 Length:421 Species:Arabidopsis thaliana


Alignment Length:424 Identity:134/424 - (31%)
Similarity:208/424 - (49%) Gaps:64/424 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT---LKY 70
            :|:|||.|:.|||..|:..|..|.|:.:.:|......:......: :.||..     ||   ::.
plant     5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTT-LSDEID-----LTSAAVRR 63

  Fly    71 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYV 135
            ||:.|.:.|.|...:||.|.|.:.|.:||....:|||||||:..:.:....:::||.|...::|:
plant    64 PIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDFGFSSLYI 128

  Fly   136 A-IQAVLSLYASGR---------TTGIVLDSGDGVSHTVPIYEGFALPHAILRLDLAGRDLTDYL 190
            | .|:::.||.:.|         ...:|:|.|...:|.||:...|.|.|||.|:||.|:..|:||
plant   129 AHPQSLVHLYEASRQPDSILSKTQCSLVVDCGFSFTHAVPVLHNFTLNHAIKRIDLGGKAFTNYL 193

  Fly   191 MKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKS-YELPDGQVITIG-- 252
            .::::.|  |.....|..:|.|.|||||:|:||..:::..|....:|.|| |.||||...|.|  
plant   194 KELVSYR--SINVMDETFLVDDAKEKLCFVSLDLLRDLRLARNGNTLIKSTYVLPDGVTHTKGYV 256

  Fly   253 ----------------------------------------NERFRCPEALFQPSFLGMESCGIHE 277
                                                    ||||..||.||||:.|||...|:.|
plant   257 KDPQAAKRFLSLSEKESVVVMDKVGERKKADMNKNEIDLTNERFLVPETLFQPADLGMNQAGLAE 321

  Fly   278 TVYNSIMKCDVDIRKDLYANSVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWI 342
            .:..:|..|...::..||.:.:|:||:|::|.:.:|::.|:..|.|....:||....:....||.
plant   322 CIVRAINSCHSYLQPVLYQSIILTGGSTLFPQLKERLEGELRPLVPDHFDVKITTQEDPILGVWR 386

  Fly   343 GGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 376
            |||:|||...|:.|.::|.||:|.|.....|:.|
plant   387 GGSLLASSPDFESMCVTKAEYEELGSARCRRRFF 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act88FNP_524367.1 ASKHA_NBD_actin 8..371 CDD:466823 132/417 (32%)
ARP6NP_566861.1 ASKHA_NBD_Arp6 4..411 CDD:466816 131/413 (32%)

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