DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Act88F and ACT9

DIOPT Version :9

Sequence 1:NP_524367.1 Gene:Act88F / 41885 FlyBaseID:FBgn0000047 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_181739.1 Gene:ACT9 / 818809 AraportID:AT2G42090 Length:366 Species:Arabidopsis thaliana


Alignment Length:367 Identity:251/367 - (68%)
Similarity:301/367 - (82%) Gaps:5/367 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 73
            :|.|.|.||.:||||||:||:.|||.:|||||.     |:...:||||:|..:.|.|||||.|:|
plant     4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTLKDPME 63

  Fly    74 HGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 138
            |||:.||||||||||:||||||||.||||||||||||.|||||||||||||||:|:.|||||::|
plant    64 HGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQ 128

  Fly   139 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 203
            :||.||:||||||:|||.|:.||||||:|||:||||.||||||.||||||||::|:|||||::||
plant   129 SVLYLYSSGRTTGVVLDLGERVSHTVPVYEGYALPHGILRLDLGGRDLTDYLIEIMTERGYTYTT 193

  Fly   204 TAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 268
            :|||||||||||||||||||:||||.......:::|:|.|||||.|||..|||.|||.|||||.:
plant   194 SAEREIVRDIKEKLCYVALDYEQEMEKTTKGWTIDKTYVLPDGQEITIEAERFMCPEVLFQPSVI 258

  Fly   269 GMESCGIHETVYNSIMKCDVDIRKDLYANSVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAP 333
            |.||.||||...|||:||.||.|:|:|.|.:::|||||..||.:||.||:.||.||::|:|::.|
plant   259 GKESSGIHEATRNSILKCPVDTRRDMYGNILMTGGTTMLHGIKERMTKELNALVPSSMKVKVVVP 323

  Fly   334 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKC 375
            ||.:.|||||||||||||||.||||:|.||:|.|..||||||
plant   324 PESECSVWIGGSILASLSTFHQMWITKDEYEEHGAAIVHRKC 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act88FNP_524367.1 PTZ00281 1..376 CDD:173506 251/367 (68%)
ACT9NP_181739.1 ACTIN 2..365 CDD:214592 249/365 (68%)
NBD_sugar-kinase_HSP70_actin 1..365 CDD:302596 249/365 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 1 1.000 - - FOG0000057
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11937
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.920

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