DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act88F and Actrt3

DIOPT Version :10

Sequence 1:NP_524367.1 Gene:Act88F / 41885 FlyBaseID:FBgn0000047 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_083966.1 Gene:Actrt3 / 76652 MGIID:1923902 Length:369 Species:Mus musculus


Alignment Length:368 Identity:172/368 - (46%)
Similarity:254/368 - (69%) Gaps:6/368 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 73
            :||||||||.|||.||...|:.|:|:|:||.:..   ....:::..|||:||.:|..|::.||:|
Mouse     8 VVIDNGSGMIKAGLAGTREPQFVYPNILGRSKGH---TADSRQELCVGDQAQERRSFLSISYPVE 69

  Fly    74 HGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 138
            .|:|::|.|||.:|.|.:...|.:...:.|||:||..|||.|:|:.::::.||....||.|::.|
Mouse    70 RGLISSWGDMEIMWKHIYDYNLNLNASDGPVLVTEPALNPLADRQHISEVFFENLGVPAFYMSAQ 134

  Fly   139 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 203
            |||:|:|:|.|||:||:||.|::..|||:||:.|.|.:.:|::||.|||.|||.:|...|.....
Mouse   135 AVLALFAAGFTTGLVLNSGAGITQCVPIFEGYCLSHGVKQLNVAGSDLTSYLMMLLKGDGIMLLR 199

  Fly   204 TAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 268
            |.:|::|.||||..||||:::|.||   ...::|||.|.||||:.:.:..:.|.||||||.|..:
Mouse   200 TGDRKVVTDIKENACYVAMNYEDEM---TKDSNLEKIYTLPDGKTVKLHKQLFHCPEALFSPYLV 261

  Fly   269 GMESCGIHETVYNSIMKCDVDIRKDLYANSVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAP 333
            .:::.||.:..:.||||||.|:|...::|.:||||:|.:||:..|:.|::..|||:...:::|||
Mouse   262 NVDAPGIDKMCFGSIMKCDTDLRNSFFSNIILSGGSTSFPGLDKRLIKDVAKLAPANTAVQVIAP 326

  Fly   334 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 376
            ||||.|||:|||||||||.||.|||:..|::|.||.|||::||
Mouse   327 PERKISVWMGGSILASLSAFQDMWITAAEFEEVGPNIVHQRCF 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act88FNP_524367.1 ASKHA_NBD_actin 8..371 CDD:466823 167/361 (46%)
Actrt3NP_083966.1 ASKHA_NBD_actin_Arp-T1-3 6..360 CDD:466848 165/357 (46%)

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