DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Act88F and Actl11

DIOPT Version :9

Sequence 1:NP_524367.1 Gene:Act88F / 41885 FlyBaseID:FBgn0000047 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_080614.1 Gene:Actl11 / 67722 MGIID:1914972 Length:1207 Species:Mus musculus


Alignment Length:366 Identity:148/366 - (40%)
Similarity:220/366 - (60%) Gaps:21/366 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 72
            |:|||.|:|..|.|.|.::...:|.||.|...:|.    ..||....|.:..:....:|      
Mouse   860 AIVIDTGTGFTKCGLAQENHVLSVVPSQVQMLQHP----PQGQPQYVVPEHQEGSYSVL------ 914

  Fly    73 EHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAI 137
            ..|::::||.:|.:|.|.||.:|:|.|||..||:.::|::|:.||||:.:|:||.|:.|||....
Mouse   915 NRGVVSDWDALEVLWQHLFYCKLKVQPEEMAVLVADSPISPRTNREKVAEILFERFHVPAMQTVH 979

  Fly   138 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFALPHAILRLDLAGRDLTDYLMKILTERGYSFT 202
            ||:|:|||.|||||:|:.||.|.|:..||..|...|....|||:||.||||||.::|...|:|. 
Mouse   980 QALLTLYAYGRTTGLVVGSGHGTSYVAPIITGDLAPIDTYRLDVAGADLTDYLTQLLLSGGHSL- 1043

  Fly   203 TTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSF 267
              .:..|:|.|||..||||:|...|||...:...::  :.|||..|||:|:|||.||||||||:.
Mouse  1044 --PKGGIIRQIKEACCYVAMDTATEMARNQSQVQVD--FVLPDKHVITLGSERFCCPEALFQPNL 1104

  Fly   268 LGMESCGIHETVYNSIMKCDVDIRKDLYANSVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIA 332
            ||:...|:.:....||.:.:|..::.|.||.||.||:|:..|..:||::|   |.|..   .::.
Mouse  1105 LGLNQLGLPQLALLSINRLEVKQQEQLLANVVLEGGSTLINGFPERMRQE---LGPGA---TVLG 1163

  Fly   333 PPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHR 373
            .|.|..:.|:||||:|...:||.:|::::||:|.||..|::
Mouse  1164 SPHRAVAAWLGGSIMACRDSFQSLWLTRREYEEEGPWAVYK 1204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act88FNP_524367.1 PTZ00281 1..376 CDD:173506 148/366 (40%)
Actl11NP_080614.1 Actin 860..1205 CDD:278451 148/366 (40%)
NBD_sugar-kinase_HSP70_actin 860..1204 CDD:302596 148/364 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11937
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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