DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act88F and Actl6a

DIOPT Version :9

Sequence 1:NP_524367.1 Gene:Act88F / 41885 FlyBaseID:FBgn0000047 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_062647.2 Gene:Actl6a / 56456 MGIID:1861453 Length:429 Species:Mus musculus


Alignment Length:423 Identity:152/423 - (35%)
Similarity:228/423 - (53%) Gaps:54/423 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DDAGALVIDNGSGMCKAGFAGDDAPRAVFPSIVG----RPRHQGVMVGMGQKDS------YVGDE 58
            |:.||||.|.||...:||:||:|.|:..||:.:|    |.....:|...|.|..      |:...
Mouse     9 DEVGALVFDIGSYTVRAGYAGEDCPKVDFPTAIGVVLERDDGSTMMEIDGDKGKQGGPTYYIDTN 73

  Fly    59 A-QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
            | :..|..:....|:::|::.:||..:.|..||:...::.....||||::|||.|.:|.|||:|:
Mouse    74 ALRVPRENMEAISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPVLMSEAPWNTRAKREKLTE 138

  Fly   123 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT--VPIYEGFALPHAILRLDLAGRD 185
            :|||.::.||.::...|||:.:|:||:||::|||  |.:||  :|:::|:.|...|::..|||..
Mouse   139 LMFEHYSIPAFFLCKTAVLTAFANGRSTGLILDS--GATHTTAIPVHDGYVLQQGIVKSPLAGDF 201

  Fly   186 LTDYLMKILTERGYSFT---TTAEREIVRD-------IKEKL-------------CYVALDFEQE 227
            :|....::..|......   ..|.:|.||:       .||||             | |..||:..
Mouse   202 ITMQCRELFQEMNIELIPPYMIASKEAVREGSPANWKRKEKLPQVTRSWHNYMCNC-VIQDFQAS 265

  Fly   228 MATAAASTSLEK--------SYELPDGQVITIGNERFRCPEALFQPS----FLGMESCGIHETVY 280
            :...:.||..|:        .||.|:|.....|.||.:.||.||.||    ..|....|:...|.
Mouse   266 VLQVSDSTYDEQVAAQMPTVHYEFPNGYNCDFGAERLKIPEGLFDPSNVKGLSGNTMLGVSHVVT 330

  Fly   281 NSIMKCDVDIRKDLYANSVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIA---PPERKYSVWI 342
            .|:..||:|||..||.:.:::||.|:.....||:.:|::...|.::::|:||   ..||::|.||
Mouse   331 TSVGMCDIDIRPGLYGSVIVAGGNTLIQSFTDRLNRELSQKTPPSMRLKLIANNTTVERRFSSWI 395

  Fly   343 GGSILASLSTFQQMWISKQEYDESGPGIVHRKC 375
            ||||||||.||||||||||||:|.|...|.|||
Mouse   396 GGSILASLGTFQQMWISKQEYEEGGKQCVERKC 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act88FNP_524367.1 PTZ00281 1..376 CDD:173506 152/423 (36%)
Actl6aNP_062647.2 Actin 11..429 CDD:394979 151/421 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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