DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Act88F and actl6b

DIOPT Version :9

Sequence 1:NP_524367.1 Gene:Act88F / 41885 FlyBaseID:FBgn0000047 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_005170633.1 Gene:actl6b / 553775 ZFINID:ZDB-GENE-050522-191 Length:426 Species:Danio rerio


Alignment Length:426 Identity:161/426 - (37%)
Similarity:229/426 - (53%) Gaps:63/426 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DDAGALVIDNGSGMCKAGFAGDDAPRAVFPSIVG------RPRHQGVMVGMGQKDSYVGDEA--Q 60
            |:.||||.|.||...:||:||:|.|:|.||:.:|      .|...||........||..|..  .
Zfish     9 DEVGALVFDIGSFSTRAGYAGEDCPKADFPTTIGVNAEEEGPADMGVEQESNSGRSYYIDTTALH 73

  Fly    61 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 125
            ..|..:.|..|:::|:|.:||..:.|..|.:...::..|..||||::|||.|.:|.|||:|:::|
Zfish    74 VPRAGVELISPLKNGMIEDWDAFQAIIDHIYSKHIKSEPGLHPVLMSEAPWNSRAKREKLTELIF 138

  Fly   126 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT--VPIYEGFALPHAILRLDLAGRDLTD 188
            |.:|.||.::...|||:.:|:||.||:||||  |.:||  :|:::|:.|...|::..|||    |
Zfish   139 EHYNIPAFFLCKTAVLTAFANGRATGLVLDS--GATHTTAIPVHDGYVLQQGIVKSPLAG----D 197

  Fly   189 YL----------MKILTERGYSFTTTAEREIVRD-------IKEKL-----------C-YVALDF 224
            ::          |.|.|...|..   |.:|.||:       .|:||           | .|..||
Zfish   198 FISMQCRELFQEMNIDTVPSYMI---ASKEPVREGAPAMWTKKDKLPPVSKSWHTFMCNEVIQDF 259

  Fly   225 EQEMATAAASTSLEK--------SYELPDGQVITIGNERFRCPEALFQPS----FLGMESCGIHE 277
            :..:...:.|...|:        .||:|.|.....|.||.|.||.||.||    ..|....|:..
Zfish   260 QASVLQVSDSPYDEQVAAQMPTVHYEMPSGYSTDFGAERLRIPEGLFDPSNVKGLSGNTMLGVGH 324

  Fly   278 TVYNSIMKCDVDIRKDLYANSVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIA---PPERKYS 339
            .|..||..||:|||..||.:.:::||.|:..|..:|:.:|::..||.::::|:||   ..||::|
Zfish   325 VVTTSIGMCDIDIRPGLYGSVIVTGGNTLLQGFTERLNRELSQKAPPSMRLKLIACNSSIERRFS 389

  Fly   340 VWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKC 375
            .||||||||||.||||||||||||||.|...|.|||
Zfish   390 SWIGGSILASLGTFQQMWISKQEYDEGGKQSVERKC 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act88FNP_524367.1 PTZ00281 1..376 CDD:173506 161/426 (38%)
actl6bXP_005170633.1 NBD_sugar-kinase_HSP70_actin 10..425 CDD:302596 158/423 (37%)
Actin 11..426 CDD:278451 160/424 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.