DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act88F and actr6

DIOPT Version :9

Sequence 1:NP_524367.1 Gene:Act88F / 41885 FlyBaseID:FBgn0000047 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001016472.1 Gene:actr6 / 549226 XenbaseID:XB-GENE-5860964 Length:396 Species:Xenopus tropicalis


Alignment Length:406 Identity:107/406 - (26%)
Similarity:189/406 - (46%) Gaps:56/406 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 73
            ||:|||:...|.|::....  :|.|:...|.:...:......:.    ||.:...|:..: .|.:
 Frog     4 LVLDNGAYNAKIGYSHGQV--SVIPNCQFRTKTARLKTFTANQI----DEIKDPSGLFYI-LPYQ 61

  Fly    74 HGIITNWDDMEKIWHHTFYNEL-RVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAI 137
            .|.:.|||...::|.:.|..|: :|...:..:::||...|..:.:|.|.:|:||.:.       .
 Frog    62 KGYLVNWDVQRQVWDYLFGKEMFQVDFPDSNIIITEPYFNFSSIQESMNEILFEEYQ-------F 119

  Fly   138 QAVLSLYASGRTTG------------IVLDSGDGVSHTVPIYEGFALPHAILRLDLAGRDLTDYL 190
            ||.|.:.|...:..            |::|||...:|.||..........|:|:::.|:.:|::|
 Frog   120 QAALRINAGALSAHRYFRDNPSELCCIIVDSGYSFTHIVPFCRSKKKKEGIIRINVGGKLMTNHL 184

  Fly   191 MKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA---AASTSLEKSYELPD------- 245
            .:|::.|  ......|..::..:||.:|||:.||.::|.||   ....|:...|.|||       
 Frog   185 KEIISYR--QLQVMDETHVINQVKEDVCYVSTDFYKDMETAKLKGEENSVMVDYVLPDFSTIKKG 247

  Fly   246 -----------------GQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKD 293
                             .|::.:.||||..||.||.||.:|::..||.|.:.:||.....:::..
 Frog   248 FCKPREEMVFSGKTTAGEQILRLTNERFAVPEILFHPSDIGIQEMGIPEAIVHSINNLPEEMQPH 312

  Fly   294 LYANSVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 358
            .|.|.||:||.|::||..:|:..|:..|.|:...:.:|.|.......|.||.|::....|:.|.:
 Frog   313 FYKNIVLTGGNTLFPGFRERVFSEVRKLTPTDFDVSVILPENPISYAWEGGKIISENDDFEDMVV 377

  Fly   359 SKQEYDESGPGIVHRK 374
            ::::|:|:|..|...|
 Frog   378 TREDYEENGHIICEEK 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act88FNP_524367.1 PTZ00281 1..376 CDD:173506 107/406 (26%)
actr6NP_001016472.1 ACTIN 2..394 CDD:214592 107/406 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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