DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Act88F and zgc:101810

DIOPT Version :10

Sequence 1:NP_524367.1 Gene:Act88F / 41885 FlyBaseID:FBgn0000047 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001007773.1 Gene:zgc:101810 / 493612 ZFINID:ZDB-GENE-041121-7 Length:394 Species:Danio rerio


Alignment Length:381 Identity:183/381 - (48%)
Similarity:256/381 - (67%) Gaps:17/381 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DDAG--ALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 64
            |.||  .:|.|||:|..|.||||.:.|..:||::||||  |....:..:..||..|||||...|.
Zfish     2 DSAGRKVIVCDNGTGFVKCGFAGSNFPDHIFPALVGRPIIRSDTKVGSIEIKDLMVGDEASECRS 66

  Fly    65 ILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
            :|.:.||:|:|::.:|:||..:|.||| ...|.::|.:..|||||.|:||..||:|:.::||||:
Zfish    67 MLEVTYPMENGMVRSWEDMIHLWDHTFGPQRLNISPPDCKVLLTEPPMNPMKNRQKIAEVMFETY 131

  Fly   129 NSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFALPHAILRLDLAGRDLTDYLMKI 193
            ....:||||||||:|||.|..||:|:||||||:|..|:||||:|||...|||:||||:|.||:|:
Zfish   132 RFHGIYVAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKL 196

  Fly   194 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRC 258
            |..|||:|..||:.|.||.:|||||:|..:.|||...|..:|.|.:||.||||::|.:|.|||..
Zfish   197 LLLRGYAFNHTADFETVRMMKEKLCFVGYNIEQEQQLANETTVLVESYMLPDGRMIRVGGERFGA 261

  Fly   259 PEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANSVLSGGTTMYPGIADRMQKEITAL-- 321
            |||||||..:.:|..|:.|.::|:|...|:|:|.|||.:.|||||:|||||:..|:::||..|  
Zfish   262 PEALFQPHLVNVEGVGVAELLFNTIQAADIDLRADLYKHIVLSGGSTMYPGLPSRLEREIKQLYL 326

  Fly   322 ---------APSTIKIKIIAPPERKYSVWIGGSILAS-LSTFQQMWISKQEYDESG 367
                     ..|..||:|..||.||:.|::||::||: :...:..|:|:.||:|.|
Zfish   327 ERVLKGDTEKLSKFKIRIEDPPRRKHMVFMGGAVLANIMKDKESFWLSRAEYEEKG 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act88FNP_524367.1 ASKHA_NBD_actin 8..371 CDD:466823 180/375 (48%)
zgc:101810NP_001007773.1 ASKHA_NBD_Arp2 7..388 CDD:466821 180/376 (48%)

Return to query results.
Submit another query.