DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act88F and acta1b

DIOPT Version :10

Sequence 1:NP_524367.1 Gene:Act88F / 41885 FlyBaseID:FBgn0000047 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_999949.2 Gene:acta1b / 407658 ZFINID:ZDB-GENE-030131-55 Length:377 Species:Danio rerio


Alignment Length:377 Identity:350/377 - (92%)
Similarity:361/377 - (95%) Gaps:1/377 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MCDDD-AGALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
            ||||| ..|||.|||||:.||||||||||||||||||||||||||||||||||||||||||||||
Zfish     1 MCDDDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 65

  Fly    65 ILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 129
            |||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||
Zfish    66 ILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFN 130

  Fly   130 SPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFALPHAILRLDLAGRDLTDYLMKIL 194
            .||||||||||||||||||||||||||||||||.||||||:||||||:|||||||||||||||||
Zfish   131 VPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKIL 195

  Fly   195 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCP 259
            |||||||.|||||||||||||||||||||||.||||||:|:||.|||||||||||||||||||||
Zfish   196 TERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLGKSYELPDGQVITIGNERFRCP 260

  Fly   260 EALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANSVLSGGTTMYPGIADRMQKEITALAPS 324
            |.||||||:||||.|||||.||||||||:|||||||||:||||||||||||||||||||||||||
Zfish   261 ETLFQPSFIGMESAGIHETAYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPS 325

  Fly   325 TIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 376
            |:|||||||||||||||||||||||.||||||||:||||||:||.|||||||
Zfish   326 TMKIKIIAPPERKYSVWIGGSILASPSTFQQMWITKQEYDEAGPSIVHRKCF 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act88FNP_524367.1 ASKHA_NBD_actin 8..371 CDD:466823 338/362 (93%)
acta1bNP_999949.2 ASKHA_NBD_actin 8..372 CDD:466823 338/363 (93%)

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