DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Act88F and actl6a

DIOPT Version :10

Sequence 1:NP_524367.1 Gene:Act88F / 41885 FlyBaseID:FBgn0000047 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_989337.1 Gene:actl6a / 394962 XenbaseID:XB-GENE-491948 Length:429 Species:Xenopus tropicalis


Alignment Length:429 Identity:150/429 - (34%)
Similarity:227/429 - (52%) Gaps:66/429 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DDAGALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV-----GDEAQSK- 62
            |:.||||.|.||...:||:||:|.|:..||:.:|        |.:.::|...     ||:.:|: 
 Frog     9 DEVGALVFDIGSYSVRAGYAGEDCPKVDFPTTIG--------VVIDREDGSTPMETDGDQNKSRS 65

  Fly    63 -------------RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 114
                         |..:....|:::|:|.:||..:.|..||:...::.....||||::||..|.:
 Frog    66 PTYYIDTNSLRVPRENMEAFSPLKNGMIEDWDSFQAIIDHTYKTHIKSETNLHPVLMSEAAWNTR 130

  Fly   115 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFALPHAILRL 179
            ..|||:|::|||.:|.||.::...|||:.:|:||:||::||||...:..:|:::|:.|...|::.
 Frog   131 VKREKLTELMFEHYNIPAFFLCKTAVLTAFANGRSTGLILDSGSTHTTAIPVHDGYVLQQGIVKS 195

  Fly   180 DLAGRDLTDYLMKILTERGYSFT---TTAEREIVRD-------IKEKL-------------CYVA 221
            .|||..:|....::..|......   ..|.:|.||:       .||||             | |.
 Frog   196 PLAGDFITMQCRELFQEMTVDLIPPYMIASKEAVREGATPNWKRKEKLPQVTRSWHNYMCNC-VI 259

  Fly   222 LDFEQEMATAAASTSLEK--------SYELPDGQVITIGNERFRCPEALFQPS----FLGMESCG 274
            .||:..:...:.||..|:        .||.|:|.....|.||.:.||.||.||    ..|....|
 Frog   260 QDFQASVLQVSDSTYDEQVAAQMPTVHYEFPNGYNCDFGAERLKIPEGLFDPSNVKGLSGNTMLG 324

  Fly   275 IHETVYNSIMKCDVDIRKDLYANSVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIA---PPER 336
            :...|..|:..||:|||..||.:.:::||.|:..|..||:.:|::...|.::::|:||   ..||
 Frog   325 VSHVVTTSVGMCDIDIRPGLYGSVIVAGGNTLLQGFTDRLTRELSQKTPPSMRLKLIANNTTVER 389

  Fly   337 KYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKC 375
            ::|.||||||||||.||||||||||||:|.|...|.|||
 Frog   390 RFSSWIGGSILASLGTFQQMWISKQEYEEGGKQCVERKC 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act88FNP_524367.1 ASKHA_NBD_actin 8..371 CDD:466823 144/419 (34%)
actl6aNP_989337.1 ASKHA_NBD_Arp4_ACTL6-like 8..420 CDD:466846 145/419 (35%)

Return to query results.
Submit another query.