DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act88F and Arp3

DIOPT Version :9

Sequence 1:NP_524367.1 Gene:Act88F / 41885 FlyBaseID:FBgn0000047 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001261559.1 Gene:Arp3 / 38898 FlyBaseID:FBgn0262716 Length:418 Species:Drosophila melanogaster


Alignment Length:419 Identity:152/419 - (36%)
Similarity:216/419 - (51%) Gaps:61/419 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ALVIDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
            |.|||.|:|..|.||||:..|:.:.||.        ||....:.:..|:...|.::||||....|
  Fly     7 ACVIDVGTGYSKLGFAGNKEPQFIIPSAIAIKESARVGDTNTRRITKGIEDLDFFIGDEAFDATG 71

  Fly    65 ILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 129
             .::|||:.||::.:||.||:......:..||..||:|..||||.|||...|||...:|||||||
  Fly    72 -YSIKYPVRHGLVEDWDLMERFLEQCVFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFETFN 135

  Fly   130 SPAMYVAIQAVLSLYAS-------GRT-TGIVLDSGDGVSHTVPIYEGFALPHAILRLDLAGRDL 186
            .|.:|:|:||||:|.||       .|| ||||:||||||:|.:|:.||:.:...|..:.:|||::
  Fly   136 VPGLYIAVQAVLALAASWASRSAEERTLTGIVVDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRNI 200

  Fly   187 TDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVI-- 249
            |.::..:|.||..........|..:.||||.||:..|..:|.|          .|:...|:.|  
  Fly   201 TSFIQSLLREREVGIPPEQSLETAKAIKEKHCYICPDIAKEFA----------KYDTEPGKWIRN 255

  Fly   250 --------------TIGNERFRCPEALFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDLYANSV 299
                          .:|.|||..||..|.|.|...: :..:.|.|.|.|..|.:|:|:.||.|.|
  Fly   256 FSGVNTVTKAPFNVDVGYERFLGPEIFFHPEFSNPDFTIPLSEIVDNVIQNCPIDVRRPLYNNIV 320

  Fly   300 LSGGTTMYPGIADRMQKEIT----------------ALAPSTIKIKIIAPPERKYSVWIGGSILA 348
            ||||:||:.....|:|::|.                .:.|..|.:::|....::|:||.|||:||
  Fly   321 LSGGSTMFKDFGRRLQRDIKRSVDTRLRISENLSEGRIKPKPIDVQVITHHMQRYAVWFGGSMLA 385

  Fly   349 SLSTFQQMWISKQEYDESGPGIV-HRKCF 376
            |...|.|:..:|..|:|.||.|. |...|
  Fly   386 STPEFYQVCHTKAAYEEYGPSICRHNPVF 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act88FNP_524367.1 PTZ00281 1..376 CDD:173506 151/417 (36%)
Arp3NP_001261559.1 PTZ00280 2..417 CDD:240343 152/419 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467808
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11937
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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