DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act88F and Bap55

DIOPT Version :10

Sequence 1:NP_524367.1 Gene:Act88F / 41885 FlyBaseID:FBgn0000047 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_611209.1 Gene:Bap55 / 36956 FlyBaseID:FBgn0025716 Length:425 Species:Drosophila melanogaster


Alignment Length:419 Identity:136/419 - (32%)
Similarity:218/419 - (52%) Gaps:52/419 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DDAGALVIDNGSGMCKAGFAGDDAPRAVFPSIVG-------------RPRHQGVMVGMGQKDSYV 55
            |:.||||.|.|....:.|:|.:|:|:|..||:||             :..:........|:..||
  Fly    11 DEIGALVFDPGHHSLRVGYAQEDSPKAEIPSVVGIGAAPETNLDPETKTDNNATPNNADQRKFYV 75

  Fly    56 G-DEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
            . :.....|..:.::..::.|:|.|||..||:..:.:.|.::..||.||||.:||..|.:.||||
  Fly    76 DTNYVTVPRSNMEVQTYMKDGMIDNWDLFEKVIDYAYANVIQSEPEYHPVLFSEASWNVRNNREK 140

  Fly   120 MTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFALPHAILRLDLAGR 184
            :|::|||.:|.||.::...|||:.::|||.|.:|:|||...:..||::||:.|..|:::..|.|.
  Fly   141 LTELMFEKYNVPAFFLVKNAVLAAFSSGRATALVVDSGATHTSAVPVHEGYVLSQAVVKSPLGGD 205

  Fly   185 DLTDYLMKILTERGYSFTTT---AEREIV----------RDIKEKLC---------YVALDFEQE 227
            .|:....:.|.:.|...:..   |.:::|          |.:.|.|.         .:..||:..
  Fly   206 FLSRQCRQHLEKHGIDLSPVYKIASKDVVKERDNGRFTLRKLPENLTQSWQNYMLQLMMQDFQMN 270

  Fly   228 MATAAASTSLEK--------SYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIM 284
            :.....:...|:        .||.|:|.....|:|||:..|:||..:.|     |..:....|:.
  Fly   271 VLQVLENPFDERVAAQIPTVHYEFPNGYHQDFGSERFKIAESLFDNAML-----GAGQLASTSVG 330

  Fly   285 KCDVDIRKDLYANSVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIA---PPERKYSVWIGGSI 346
            .||.|:|..|:.:.|::||.|:..|..:|:.:::...|||..::|:|:   ..||::..||||||
  Fly   331 MCDADVRLSLFGSVVVTGGNTLLQGFPERLNRDLQLRAPSNTRLKMISANGSVERRFGAWIGGSI 395

  Fly   347 LASLSTFQQMWISKQEYDESGPGIVHRKC 375
            |||:.||||||||.|||:|:|...|.|||
  Fly   396 LASIGTFQQMWISSQEYEEAGKSQVERKC 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act88FNP_524367.1 ASKHA_NBD_actin 8..371 CDD:466823 130/409 (32%)
Bap55NP_611209.1 ASKHA_NBD_Arp4_ACTL6-like 10..416 CDD:466846 131/409 (32%)

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