DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act88F and Arp8

DIOPT Version :9

Sequence 1:NP_524367.1 Gene:Act88F / 41885 FlyBaseID:FBgn0000047 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_573251.1 Gene:Arp8 / 32769 FlyBaseID:FBgn0030877 Length:607 Species:Drosophila melanogaster


Alignment Length:436 Identity:68/436 - (15%)
Similarity:151/436 - (34%) Gaps:139/436 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 LKYPIEHG-----------IITNWDDMEKIWHHTFYNELRVAPEE---HPVLLTEAPLNPKANRE 118
            :.:||:.|           :..:...:|:||.:.....|::...:   |..:|....:..:.:..
  Fly   177 IHFPIQRGELNVHNEKGGSLQASMQHLERIWSYALEERLKIPLRKLGTHCAVLVVNDVYVRRHLR 241

  Fly   119 KMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFALPHAILRLDLAG 183
            :...::.........::...:|.|.:.:|...|.|:|.|...:....|.:|.:...|.:||...|
  Fly   242 EFVTLLLRRLGFRRCFLVQDSVASTFGAGIGYGCVVDIGAQKTSIACIEDGISQLDARVRLSYGG 306

  Fly   184 RDLTDYLMKILTERGYSF------TTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYE 242
            .||...|:.:|.:.|:.:      .:..:..::.::|||.|::         .|:...:.||.:.
  Fly   307 GDLDQVLLLLLRKCGFPYRECNVQESYVDAHLLDELKEKFCHL---------NASVCGAQEKHFN 362

  Fly   243 L--PDGQ----VITIGNERFRCPEALF-------------------------------------- 263
            |  .:||    .|.:|:|....|.|||                                      
  Fly   363 LRKHNGQWLRYTIQVGDEALMAPLALFHTELLNITGRTKAVFTQQAVQDQYDCEDCFDAEYLKET 427

  Fly   264 --------------------QP--------------------------SFLGMESCG-------- 274
                                ||                          |.||.::.|        
  Fly   428 GRKNGVRGGDILQLSTSAGYQPRPQLPVTADDEELIVVDQDETISNCQSQLGAQTAGGQMNSNGC 492

  Fly   275 ----------IHETVYNSIMK-CDVDIRKDLYANSVLSGGTTMYPGIADRMQKEITALAPSTIKI 328
                      :.:.:..||.: ...:.::.::.:.:|.|.:...||:|..:::.|:....|.:.:
  Fly   493 YHNGQGLVLPLDQAIIQSINRLSSYETKRKMFGSILLVGSSAKLPGLAAWLEQRISQQVQSEVNV 557

  Fly   329 KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRK 374
             :|...:.....|.|.:|::.|.:.:::|||:.::...|..::..:
  Fly   558 -LIKGMDAGMVAWKGAAIMSVLESARELWISQNDWQRHGLRVLRER 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act88FNP_524367.1 PTZ00281 1..376 CDD:173506 68/436 (16%)
Arp8NP_573251.1 NBD_sugar-kinase_HSP70_actin 202..603 CDD:302596 65/411 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467799
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11937
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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