DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act88F and Actl7b

DIOPT Version :9

Sequence 1:NP_524367.1 Gene:Act88F / 41885 FlyBaseID:FBgn0000047 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001020588.1 Gene:Actl7b / 313183 RGDID:1305655 Length:417 Species:Rattus norvegicus


Alignment Length:370 Identity:168/370 - (45%)
Similarity:234/370 - (63%) Gaps:6/370 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ALVIDNGSGMCKAGFAGDDAPRAVFPSIVG-RPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 71
            |||||.||..||.|:||:..|.....|.|| |........|...|::|||.|..:....|.|..|
  Rat    52 ALVIDLGSQYCKCGYAGEPRPTYFISSTVGKRSAEMAADAGDTFKETYVGHELLNMEASLKLVNP 116

  Fly    72 IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVA 136
            ::||::.:||.::.||.:.|:..:::.||||.||:::.||:|.:||||..::|||||..|||:|.
  Rat   117 LKHGVVVDWDCIQNIWEYIFHTAMKILPEEHAVLVSDPPLSPTSNREKYAELMFETFGIPAMHVT 181

  Fly   137 IQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
            .||:||:|:.|:|:|:|::||.||||.|||.||..||....|:|.||.|||:|||::|.|.|:.|
  Rat   182 SQALLSIYSYGKTSGLVVESGHGVSHVVPISEGDLLPGLPSRVDYAGCDLTNYLMQLLNEAGHKF 246

  Fly   202 TTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPS 266
            :.. ...|:..||:|.||.||..|:||:...  ..|...||||||:|||||.|||||.|.||:||
  Rat   247 SDD-HLHIIEHIKKKCCYAALLPEEEMSLGL--DELHVDYELPDGKVITIGQERFRCSEMLFKPS 308

  Fly   267 FLGMESCGIHETVYNSIMKCD-VDIRKDLYANSVLSGGTTMYPGIADRMQKEITALAPSTIKIKI 330
            .:|....|:.|.....:.:|. ...::::.||.:|.||.||..|..:|.|:|::.|.|.. ...:
  Rat   309 LVGSTQPGLPELTATCLDRCQGTGFKEEMAANVLLCGGCTMLDGFPERFQRELSLLCPGD-SPTV 372

  Fly   331 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKC 375
            .|.||||.|||.||||||||..|||:|:||:|::|.|...::.||
  Rat   373 AAAPERKTSVWTGGSILASLQAFQQLWVSKEEFEERGCAAIYSKC 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act88FNP_524367.1 PTZ00281 1..376 CDD:173506 168/370 (45%)
Actl7bNP_001020588.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..39
ACTIN 51..417 CDD:214592 166/368 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11937
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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