DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act88F and alp5

DIOPT Version :10

Sequence 1:NP_524367.1 Gene:Act88F / 41885 FlyBaseID:FBgn0000047 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_595820.1 Gene:alp5 / 2541318 PomBaseID:SPBP23A10.08 Length:433 Species:Schizosaccharomyces pombe


Alignment Length:438 Identity:130/438 - (29%)
Similarity:204/438 - (46%) Gaps:80/438 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DDAGALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
            |:..|:|||.||...:.||:|:|.|:.|.||..|.......:.|    :.|:   .:|..| :.:
pombe     9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCGEFSDGRRLFG----EEYI---YKSNPG-MEI 65

  Fly    69 KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAM 133
            |..|.:|.:.|||....:|.:....:|:..|.|||:|:||...||..||.|..:.|||:...||.
pombe    66 KNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVKTLETMFESLRCPAT 130

  Fly   134 YVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFALPHAILRLDLAGRDLTDYLMKILTERG 198
            |:|.|...:.:|||:.|..::|.|...|....||:||.|.........:|..:.|.|.:.|.::.
pombe   131 YLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVLQKGYQVQHFSGNAINDILAQTLRDKN 195

  Fly   199 Y-------------------------------SFTTTAEREIVRDIKEKLCYVALDFEQEMATAA 232
            :                               |:.....:.:..:.||:...::     ::..::
pombe   196 FEVMPKYLVKSKNPVEIGQPANCELRPRDTTDSYHQFQVQRVYDEWKEECALIS-----DVPFSS 255

  Fly   233 ASTSLEKSYELPDGQVITIGNERFRCPEALFQP---------------------------SFLGM 270
            .:|..|..:|.|||..:..|.||::.||.||.|                           |....
pombe   256 ETTIAESEFEFPDGSRMMFGAERYQIPEHLFVPGSDEEMNEEPSKPIEQTENNEVSQQDSSVTNT 320

  Fly   271 ES--CGIHETVYNSIMKCDVDIRKDLYANSVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAP 333
            .|  .||.:...|.|.:||||||..|..|.::.|||::..|.:.|:|.|::.|.|.: ::||.|.
pombe   321 SSRILGIPQLFQNCISECDVDIRASLLNNVIVCGGTSLMQGFSLRLQNELSKLYPGS-RLKIHAS 384

  Fly   334 ---PERKYSVWIGGSILASLSTFQQMWISKQEYDESGP---GIVHRKC 375
               .||.|:.|:|||||:||.||.|:|||:|||:|.|.   .::.::|
pombe   385 GHVVERSYASWLGGSILSSLGTFHQLWISRQEYEEHGSDRLALIEKRC 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act88FNP_524367.1 ASKHA_NBD_actin 8..371 CDD:466823 128/428 (30%)
alp5NP_595820.1 ASKHA_NBD_Arp4_ACTL6-like 8..421 CDD:466846 128/425 (30%)

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