DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act88F and arp1

DIOPT Version :9

Sequence 1:NP_524367.1 Gene:Act88F / 41885 FlyBaseID:FBgn0000047 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_596704.1 Gene:arp1 / 2539676 PomBaseID:SPBC1347.12 Length:379 Species:Schizosaccharomyces pombe


Alignment Length:373 Identity:181/373 - (48%)
Similarity:258/373 - (69%) Gaps:2/373 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DAGALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLK 69
            |...:.||||||..||||||||.|:.:||:.|||.:|:.||....|||.:||.|||:.||:|.::
pombe     8 DNQPICIDNGSGFIKAGFAGDDIPKCLFPTCVGRIKHERVMPSSIQKDMFVGSEAQNLRGLLKIQ 72

  Fly    70 YPIEHGIITNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAM 133
            .|||.|||.||.|||:||.:.:.: :|...|||||:||||.||....|:||:.:..:||.|.||:
pombe    73 RPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEHPLLLTEPPLANIRNKEKIAEYFYETLNVPAL 137

  Fly   134 YVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFALPHAILRLDLAGRDLTDYLMKILTERG 198
            ..::|.||:||||.|||||||:.|||::|:||||:||::|.||.:.::.|||:||||...|.:.|
pombe   138 SFSLQPVLALYASARTTGIVLECGDGLTHSVPIYDGFSIPSAIQQEEIGGRDVTDYLQLQLRKSG 202

  Fly   199 YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALF 263
            :...::||:||||:||||.||||.||..|:.:.........:|:|||.|.||:|.|.|..||.||
pombe   203 HELVSSAEKEIVREIKEKCCYVASDFRSEIESWTEHKPQIHTYQLPDNQTITLGTECFSAPEVLF 267

  Fly   264 QPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANSVLSGGTTMYPGIADRMQKEITALAPSTIKI 328
            .|..:|.|:.|:|..::.||:..|:|:|..||:|.|||||:|:..|..:|...|:.|::....::
pombe   268 NPEMMGSEASGLHIQLFKSILLSDIDLRSTLYSNIVLSGGSTLLRGFGERFISELRAISGKKNQV 332

  Fly   329 KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 376
            ||.|.|||.::.|:|||||||||||:::.|:.:|| ::...::.|:.|
pombe   333 KIYASPERMHNAWLGGSILASLSTFRRLLITSEEY-KNDQNVIFRRRF 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act88FNP_524367.1 PTZ00281 1..376 CDD:173506 180/371 (49%)
arp1NP_596704.1 NBD_sugar-kinase_HSP70_actin 3..378 CDD:302596 180/370 (49%)
ACTIN 9..367 CDD:214592 176/357 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000057
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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