DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act88F and act-3

DIOPT Version :10

Sequence 1:NP_524367.1 Gene:Act88F / 41885 FlyBaseID:FBgn0000047 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001366892.1 Gene:act-3 / 179533 WormBaseID:WBGene00000065 Length:376 Species:Caenorhabditis elegans


Alignment Length:376 Identity:357/376 - (94%)
Similarity:371/376 - (98%) Gaps:0/376 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MCDDDAGALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 65
            ||||:..|||:||||||||||||||||||||||||||||||||||||||||||||||||||||||
 Worm     1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 65

  Fly    66 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 130
            |||||||||||:||||||||||||||||||||||||||||||||||||||||||||||||||||:
 Worm    66 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130

  Fly   131 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFALPHAILRLDLAGRDLTDYLMKILT 195
            |||||||||||||||||||||:||||||||:||||||||:|||||||||||||||||||||||||
 Worm   131 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 195

  Fly   196 ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPE 260
            |||||||||||||||||||||||||||||||||||||:|:|||||||||||||||:|||||||||
 Worm   196 ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPE 260

  Fly   261 ALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANSVLSGGTTMYPGIADRMQKEITALAPST 325
            |:||||||||||.|||||.||||||||:|||||||||:|||||||||||||||||||||||||||
 Worm   261 AMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPST 325

  Fly   326 IKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 376
            :||||||||||||||||||||||||||||||||||||||||||.|||||||
 Worm   326 MKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act88FNP_524367.1 ASKHA_NBD_actin 8..371 CDD:466823 346/362 (96%)
act-3NP_001366892.1 ASKHA_NBD_actin 7..371 CDD:466823 346/363 (95%)

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