DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act88F and arx-2

DIOPT Version :9

Sequence 1:NP_524367.1 Gene:Act88F / 41885 FlyBaseID:FBgn0000047 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_505657.1 Gene:arx-2 / 179440 WormBaseID:WBGene00000200 Length:395 Species:Caenorhabditis elegans


Alignment Length:382 Identity:188/382 - (49%)
Similarity:254/382 - (66%) Gaps:18/382 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DDAG--ALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 64
            |..|  .:|:|||:|..|.|:||.:.|..:|||:||||  |....:..:..||..||:|....|.
 Worm     2 DSQGRKVIVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQ 66

  Fly    65 ILTLKYPIEHGIITNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
            :|.:.||:::||:.|||||..:|.|||..| |.:.|:|..:||||.||||.:|||||.|:|||.:
 Worm    67 MLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMFEQY 131

  Fly   129 NSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFALPHAILRLDLAGRDLTDYLMKI 193
            ...::|||:||||:|||.|..||:|:||||||:|..|:||||||.|...|||:||||:|.||:|:
 Worm   132 GFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRDITKYLIKL 196

  Fly   194 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRC 258
            |.:|||:|..:|:.|.||.:||||||:|.|.|||...|..:|.|.:.|.||||:||.:|.|||..
 Worm   197 LLQRGYNFNHSADFETVRQMKEKLCYIAYDVEQEERLALETTVLSQQYTLPDGRVIRLGGERFEA 261

  Fly   259 PEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANSVLSGGTTMYPGIADRMQKEITAL-- 321
            ||.||||..:.:|..|:.|.::..|...|:|.|.|.|.:.|||||||||||:..|::||:..|  
 Worm   262 PEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKELKQLYL 326

  Fly   322 ---------APSTIKIKIIAPPERKYSVWIGGSILASL--STFQQMWISKQEYDESG 367
                     |....||:|.|||.||:.|::||::||:|  ...|..|:||:||:|.|
 Worm   327 DRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYEEGG 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act88FNP_524367.1 PTZ00281 1..376 CDD:173506 188/382 (49%)
arx-2NP_505657.1 NBD_sugar-kinase_HSP70_actin 1..383 CDD:302596 187/380 (49%)
ACTIN 6..392 CDD:214592 186/378 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S102
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.770

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