DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act88F and ACTRT2

DIOPT Version :10

Sequence 1:NP_524367.1 Gene:Act88F / 41885 FlyBaseID:FBgn0000047 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_536356.3 Gene:ACTRT2 / 140625 HGNCID:24026 Length:377 Species:Homo sapiens


Alignment Length:372 Identity:181/372 - (48%)
Similarity:253/372 - (68%) Gaps:2/372 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DAGALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLK 69
            |:.|::.|||||.||||.:|:..||.:..||||..:.|.......||..:||:||..|:..|.|.
Human     8 DSPAVIFDNGSGFCKAGLSGEFGPRHMVSSIVGHLKFQAPSAEANQKKYFVGEEALYKQEALQLH 72

  Fly    70 YPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMY 134
            .|.|.|:||.|||:|::|.|.|..||.|.|.:.|:|.||..|||:.|||||.::|||.|..||.|
Human    73 SPFERGLITGWDDVERLWKHLFEWELGVKPSDQPLLATEPSLNPRENREKMAEVMFENFGVPAFY 137

  Fly   135 VAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFALPHAILRLDLAGRDLTDYLMKILTERGY 199
            ::.||||:||||...||:|:||||.|:.||||:||::||||:.:|.:||||:|:.||::|...|:
Human   138 LSDQAVLALYASACVTGLVVDSGDAVTCTVPIFEGYSLPHAVTKLHVAGRDITELLMQLLLASGH 202

  Fly   200 SFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQ 264
            :|....::.:|.|||:|||||||:.|:|::........|  |:||||.:|::|:...:.|||||.
Human   203 TFPCQLDKGLVDDIKKKLCYVALEPEKELSRRPEEVLRE--YKLPDGNIISLGDPLHQAPEALFV 265

  Fly   265 PSFLGMESCGIHETVYNSIMKCDVDIRKDLYANSVLSGGTTMYPGIADRMQKEITALAPSTIKIK 329
            |..||.:|.|:...|.:||.|||.||:|.|:...|||||||::.|:.||:.||:..||.....||
Human   266 PQQLGSQSPGLSNMVSSSITKCDTDIQKILFGEIVLSGGTTLFHGLDDRLLKELEQLASKDTPIK 330

  Fly   330 IIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 376
            |.|||:|.:|.|||.||:.|||:|:|||::..::.|.|..:|.|:||
Human   331 ITAPPDRWFSTWIGASIVTSLSSFKQMWVTAADFKEFGTSVVQRRCF 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act88FNP_524367.1 ASKHA_NBD_actin 8..371 CDD:466823 176/362 (49%)
ACTRT2NP_536356.3 ASKHA_NBD_actin_Arp-T1-3 10..368 CDD:466848 175/359 (49%)

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