DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Act88F and ACTR1B

DIOPT Version :10

Sequence 1:NP_524367.1 Gene:Act88F / 41885 FlyBaseID:FBgn0000047 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_005726.1 Gene:ACTR1B / 10120 HGNCID:168 Length:376 Species:Homo sapiens


Alignment Length:370 Identity:205/370 - (55%)
Similarity:278/370 - (75%) Gaps:7/370 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 73
            :|||||||:.|||||||..|:..||:.||||:|..||.|..:.|.::|.:|:..||:||::||:|
Human    12 VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHMRVMAGALEGDLFIGPKAEEHRGLLTIRYPME 76

  Fly    74 HGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAI 137
            ||::.:|:|||:||.:.: .::|:...||||||||||||||..||||..::.|||||.||:::::
Human    77 HGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKNREKAAEVFFETFNVPALFISM 141

  Fly   138 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFALPHAILRLDLAGRDLTDYLMKILTERGYSFT 202
            ||||||||:|||||:||||||||:|.||||||||:||:|:|:|:||||::.||..:|.:.|..|.
Human   142 QAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVSRYLRLLLRKEGVDFH 206

  Fly   203 TTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEK-SYELPDGQVITIGNERFRCPEALFQPS 266
            |:||.|:||.|||:.||::::.:::.|     ...|| .|.||||..:.:|..|||.||.||||.
Human   207 TSAEFEVVRTIKERACYLSINPQKDEA-----LETEKVQYTLPDGSTLDVGPARFRAPELLFQPD 266

  Fly   267 FLGMESCGIHETVYNSIMKCDVDIRKDLYANSVLSGGTTMYPGIADRMQKEITALAPSTIKIKII 331
            .:|.||.|:||.|..:|.|.|:|:|:.|:||.|||||:|::.|..||:..|:..|||..|||||.
Human   267 LVGDESEGLHEVVAFAIHKSDMDLRRTLFANIVLSGGSTLFKGFGDRLLSEVKKLAPKDIKIKIS 331

  Fly   332 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 376
            ||.||.||.||||||||||.||::||:||:||:|.|...:|||.|
Human   332 APQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGSRAIHRKTF 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act88FNP_524367.1 ASKHA_NBD_actin 8..371 CDD:466823 201/363 (55%)
ACTR1BNP_005726.1 ASKHA_NBD_Arp1 9..375 CDD:466820 203/367 (55%)

Return to query results.
Submit another query.