DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6118 and mod(mdg4)

DIOPT Version :9

Sequence 1:NP_001097806.1 Gene:CG6118 / 41884 FlyBaseID:FBgn0038339 Length:967 Species:Drosophila melanogaster
Sequence 2:NP_788698.1 Gene:mod(mdg4) / 49228 FlyBaseID:FBgn0002781 Length:610 Species:Drosophila melanogaster


Alignment Length:593 Identity:124/593 - (20%)
Similarity:200/593 - (33%) Gaps:199/593 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   391 DQYLLSWNNFHGNMCRGFHSLQKDEKMVDVTIAAGGKIFKAHKLVLSVCSPYFQQIFLENPS-SH 454
            :|:.|.||||:.|:..|||.......:|||::||.|:|.|||:||||||||:|:::|.:.|| :|
  Fly     5 EQFSLCWNNFNTNLSAGFHESLCRGDLVDVSLAAEGQIVKAHRLVLSVCSPFFRKMFTQMPSNTH 69

  Fly   455 PILLMADVEASHMAGLLDFMYSGQVNVKYEDLPVFLKVAEAMKIKGLHTEKNLDSDASDISSPHE 519
            .|:.:.:|..|.:..|:.|||.|:||||.:.||.|:..||:::||||     .|:|.        
  Fly    70 AIVFLNNVSHSALKDLIQFMYCGEVNVKQDALPAFISTAESLQIKGL-----TDNDP-------- 121

  Fly   520 SDGTECRYERGTHSVNITSGHAAGYGGAPS-SQQSSPSPSLNGPNRCPTPLSSGGSGNPNYAGFR 583
                                       ||. .|:|||.|:                        .
  Fly   122 ---------------------------APQPPQESSPPPA------------------------A 135

  Fly   584 EHIKSKATLAETFMKNLNRNNNNNNSSNNYNHLGGSNGSLNLTEADSNSFAILQANSKKMLDSAR 648
            .|::.:...|:...                                                  |
  Fly   136 PHVQQQQIPAQRVQ--------------------------------------------------R 150

  Fly   649 KQHKYLAKRKILMHYNTELGGEKRLKEMERDRYPSAEQHDDALNNNHSHAQDNIMEPIITTIVPQ 713
            :|.:..|:.||                         |..||.|.:........:::   ||..||
  Fly   151 QQPRASARYKI-------------------------ETVDDGLGDEKQSTTQIVIQ---TTAAPQ 187

  Fly   714 TPPPSTHNNNFKIRLVESHHLTNNSNNNQNQSSNN----NNSSSSPQSNDCNNDEEALNLVQIPN 774
            .............:.::|..|...:.......|.|    ..||.:|.|:...        |:...
  Fly   188 ATIVQQQQPQQAAQQIQSQQLQTGTTTTATLVSTNKRSAQRSSLTPASSSAG--------VKRSK 244

  Fly   775 ANGSRN-----REATPTCATPTPDIQLIKREVKTELSPAENLSNNNGHDDEMAGAGFDRKYDDNN 834
            .:.|.|     ...|.|.||.|  .||:.:::..:.|....................:.:|.|  
  Fly   245 TSTSANVMDPLDSTTETGATTT--AQLVPQQITVQTSVVSAAEAKLHQQSPQQVRQEEAEYID-- 305

  Fly   835 NNSGLDME--TDSNNNNSKPGGDNNNGLALALGKHKLLSAINRNIEQD-HPDHEHQDQQDREADH 896
                |.||  |.|..:.|:..||       |.|     .|....:|.| :.|..:.|....|.:.
  Fly   306 ----LPMELPTKSEPDYSEDHGD-------AAG-----DAEGTYVEDDTYGDMRYDDSYFTENED 354

  Fly   897 GGNNCNSDDN---------------NNNNHSQHLDLSTIKNIATAEILCGLKSKVLKLEEEQRER 946
            .||...::.:               .:.|:|:...:.|..:....|......:...|:...:|.|
  Fly   355 AGNQTAANTSGGGVTATTSKAVVKQQSQNYSESSFVDTSGDQGNTEAQAATSASATKIPPRKRGR 419

  Fly   947 ERERERER 954
            .:.:..::
  Fly   420 PKTKVEDQ 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6118NP_001097806.1 Myb_DNA-bind_4 20..97 CDD:290549
BTB 408..508 CDD:279045 46/100 (46%)
BTB 419..510 CDD:197585 44/91 (48%)
mod(mdg4)NP_788698.1 BTB 22..118 CDD:279045 46/100 (46%)
BTB 33..118 CDD:197585 43/89 (48%)
FLYWCH 452..512 CDD:282369
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 63 1.000 Domainoid score I10232
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm40394
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.100

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