DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6118 and CG34376

DIOPT Version :9

Sequence 1:NP_001097806.1 Gene:CG6118 / 41884 FlyBaseID:FBgn0038339 Length:967 Species:Drosophila melanogaster
Sequence 2:NP_732741.1 Gene:CG34376 / 42638 FlyBaseID:FBgn0085405 Length:681 Species:Drosophila melanogaster


Alignment Length:553 Identity:140/553 - (25%)
Similarity:218/553 - (39%) Gaps:174/553 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   391 DQYLLSWNNFHGNMCRGFHSLQKDEKMVDVTIAAGGKIFKAHKLVLSVCSPYFQQIFLENPSSHP 455
            |::.|.|.||..|:..||.:|.....:||||:|..||:..|||:||::||||||:||..||..||
  Fly     3 DEFKLCWKNFQDNIASGFQNLYDRGDLVDVTLACDGKLLHAHKIVLAICSPYFQEIFTTNPCKHP 67

  Fly   456 ILLMADVEASHMAGLLDFMYSGQVNVKYEDLPVFLKVAEAMKIKGLHTEKNLDSDASDISSPHES 520
            |:::.||..:.|..||:|||.|.||||:.:|..|:|:.:.::||||.|..| .|..|.:|....|
  Fly    68 IIILKDVSFNIMMELLEFMYQGVVNVKHTELQSFMKIGQLLQIKGLATNSN-SSPGSSVSEKSSS 131

  Fly   521 DGTECRYERGTHSVNITSGHAAGYGGAPSSQQSSPSPSLNGPNRCPTPLSSGGSGNPNYAGFREH 585
            .                          |.:::||.:.|.|..|       |..:.|.|.....:|
  Fly   132 Q--------------------------PPAEESSNTNSTNHHN-------SSTNSNNNSKSETDH 163

  Fly   586 IKSKATLAETFMKNLNRNNNNNNS-------SNNYNHLGGSNGSLNLTEADSNSFAILQANSKKM 643
            .:||           .::|:...|       ||:.:||..||.....::..|:|.:|.   |.|.
  Fly   164 NESK-----------GQSNSRTTSPGGASRASNDASHLYTSNKRPMPSDFGSDSLSIY---SGKQ 214

  Fly   644 LDSARKQHKYLAKRKILMHYNTELGGEKRLKEMERDRYPSAEQHDDALNNNHSHAQDNIMEPIIT 708
            |..:.|.|.         ...:|.||        .|...:|...|:::|     :::..:.||  
  Fly   215 LRRSLKDHG---------SGGSEGGG--------GDHADTAAGLDNSMN-----SEEFFLPPI-- 255

  Fly   709 TIVPQ-TPPPSTHNNNFKIRLVESHHLTNNSNNNQNQSSNNNNSSSSPQSNDCNNDEEALNLVQI 772
               || |.....::.....|..:.||       :...|:...||.|.                  
  Fly   256 ---PQITMGEQRYDLGGLKRESDGHH-------HGPLSAGGGNSGSV------------------ 292

  Fly   773 PNANGSRNREATPTCATPTPDIQLIKREVKTELSPAENLSNNNGHDDEMAGAGFDRKYDDNNNNS 837
                ||....|:|:                   :|..|....|..|      .|:  |....|:|
  Fly   293 ----GSLTSSASPS-------------------APIRNPFAPNFMD------SFN--YYKGGNSS 326

  Fly   838 GLDMETDSNNNNSKPGGDNNNGLALALGKHKLLSAINRNIEQDHPDHEHQDQQDREADHGGNNCN 902
            |   .:.|:||:..|||.|||| ::.||.           ..::|                |...
  Fly   327 G---PSGSSNNSVGPGGVNNNG-SVGLGS-----------GAEYP----------------NELY 360

  Fly   903 SDDNNNNNHSQHLDL----STIKNIATAEILCG 931
            ..::.:.:.:.|:|:    |.:..::|..:|.|
  Fly   361 MPNDYSKSFANHMDIPSSGSNMVMLSTTSLLHG 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6118NP_001097806.1 Myb_DNA-bind_4 20..97 CDD:290549
BTB 408..508 CDD:279045 49/99 (49%)
BTB 419..510 CDD:197585 46/90 (51%)
CG34376NP_732741.1 BTB 20..113 CDD:279045 45/92 (49%)
BTB 31..115 CDD:197585 44/83 (53%)
FLYWCH 390..443 CDD:282369 2/4 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451874
Domainoid 1 1.000 68 1.000 Domainoid score I9675
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1229475at2759
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
55.040

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