DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6118 and fru

DIOPT Version :9

Sequence 1:NP_001097806.1 Gene:CG6118 / 41884 FlyBaseID:FBgn0038339 Length:967 Species:Drosophila melanogaster
Sequence 2:NP_001163648.1 Gene:fru / 42226 FlyBaseID:FBgn0004652 Length:960 Species:Drosophila melanogaster


Alignment Length:717 Identity:186/717 - (25%)
Similarity:262/717 - (36%) Gaps:171/717 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   332 HQLAHPH-------QPH---------TPRPSTPPTTAQQIHITATQHQAAQQQLHQQQQQPSHKQ 380
            |..||.|       .||         .|.|..||                 ..|......||.:.
  Fly    50 HGHAHSHYAALDLQTPHKRNIETDVRAPPPPLPP-----------------PPLPLPPASPSLQI 97

  Fly   381 QQSYADPNTID-QYLLSWNNFHGNMCRGFHSLQKDEKMVDVTIAAGGKIFKAHKLVLSVCSPYFQ 444
            .:...|...:| |:.|.|||...|:.....||.:.|.:.|||:|..|:..|||:.:||.|||||:
  Fly    98 SRYNTDQGAMDQQFCLRWNNHPTNLTGVLTSLLQREALCDVTLACEGETVKAHQTILSACSPYFE 162

  Fly   445 QIFLENPSSHPILLMADVEASHMAGLLDFMYSGQVNVKYEDLPVFLKVAEAMKIKGLHTEKNLD- 508
            .|||:|...|||:.:.||..|.|..||||||.|:|||....||:|||.||:::::||....||: 
  Fly   163 TIFLQNQHPHPIIYLKDVRYSEMRSLLDFMYKGEVNVGQSSLPMFLKTAESLQVRGLTDNNNLNY 227

  Fly   509 -SDASDISSPHESDGTECRYERGTHSVNITSGHAAGYGGAPSSQQSSPSPSLNGPNRCP------ 566
             ||...:.....|..|      |....|.|.| ..|.||...:.:.| ..||.  :||.      
  Fly   228 RSDCDKLRDSAASSPT------GRGPSNYTGG-LGGAGGVADAMRES-RDSLR--SRCERDLRDE 282

  Fly   567 -TPLSSGGSGNPNYAGFREHIKSKATLAETFMKNLNRNNNNNNSSNNYNHLGGSNGSLNLTEADS 630
             |..||......:.|.......:.|..|.         ..|.|::.....|....|........|
  Fly   283 LTQRSSSSMSERSSAAAAAAAAAAAVAAA---------GGNVNAAAVALGLTTPTGGERSPSVGS 338

  Fly   631 NSFAILQANSKKMLDSARKQHKYLAKRKILMHYNTELGGEKRLKEMERDRYPSAEQHDDALNNNH 695
            .|.|...|.....:.:|       |.|.......::.|.|:  ..:||     .:..||.|..::
  Fly   339 ASAAAAAAAVAAAVAAA-------ANRSASADGCSDRGSER--GTLER-----TDSRDDLLQLDY 389

  Fly   696 SHAQDNIMEPIITTIVPQTPPPSTHNNNFKIRLVESHHLTNNSNNNQNQSSNNNNSSSSPQSNDC 760
            |:..:|           .:...||..||           .||:|||.|.|||||||||:.:.|:.
  Fly   390 SNKDNN-----------NSNSSSTGGNN-----------NNNNNNNNNSSSNNNNSSSNRERNNS 432

  Fly   761 NNDEEALNLVQIPNANGSRNREATPTCATPTPDIQLIKREVKTELSPAENLSNNNGHDD----EM 821
            ...|..    :.......|:||.:   .||...:...||..|...|..:| |.::.|.|    :.
  Fly   433 GERERE----RERERERDRDRELS---TTPVEQLSSSKRRRKNSSSNCDN-SLSSSHQDRHYPQD 489

  Fly   822 AGAGFDRKYDDNNNNSGLDMETDSNNNNSKP----------GGDNNNGLALALG--------KHK 868
            :.|.|..........|..:.| |:...:..|          ||..|.|.|.||.        |.:
  Fly   490 SQANFKSSPVPKTGGSTSESE-DAGGRHDSPLSMTTSVHLGGGGGNVGAASALSGLSQSLSIKQE 553

  Fly   869 LLSAINRNIEQDH-----PDH-----------------------------EHQDQQDREADHGGN 899
            |:.|..:...::|     ||:                             ||.|.:..:.|...|
  Fly   554 LMDAQQQQQHREHHVALPPDYLPSAALKLHAEDMSTLLTQHALQAADARDEHNDAKQLQLDQTDN 618

  Fly   900 NCNSDDNNNNNHSQHLDLSTIKNIATAEILCGLKSKVLKLEEEQREREREREREREACRSLSEIK 964
            ........|..|.:|.|....:|....:...|:..:|  :.:..||.|...|.:.|      |:|
  Fly   619 IDGRVKCFNIKHDRHPDRELDRNHREHDDDPGVIEEV--VVDHVREMEAGNEHDPE------EMK 675

  Fly   965 NA 966
            .|
  Fly   676 EA 677

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6118NP_001097806.1 Myb_DNA-bind_4 20..97 CDD:290549
BTB 408..508 CDD:279045 49/99 (49%)
BTB 419..510 CDD:197585 47/92 (51%)
fruNP_001163648.1 BTB 126..221 CDD:279045 48/94 (51%)
BTB 137..221 CDD:197585 45/83 (54%)
C2H2 Zn finger 901..918 CDD:275368
C2H2 Zn finger 925..944 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451887
Domainoid 1 1.000 63 1.000 Domainoid score I10232
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S7558
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1229475at2759
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
76.900

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