DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6118 and bab1

DIOPT Version :9

Sequence 1:NP_001097806.1 Gene:CG6118 / 41884 FlyBaseID:FBgn0038339 Length:967 Species:Drosophila melanogaster
Sequence 2:NP_728565.1 Gene:bab1 / 38116 FlyBaseID:FBgn0004870 Length:977 Species:Drosophila melanogaster


Alignment Length:544 Identity:118/544 - (21%)
Similarity:181/544 - (33%) Gaps:201/544 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   380 QQQSYADP-NTIDQYLLSWNNFHGNMCRGFHSLQKDEKMVDVTIAAGGKIFKAHKLVLSVCSPYF 443
            :..|.|.| ::..|:.|.|||:..|:...|..|.::|..||||:|..|:..||||:|||.|||||
  Fly    88 RSSSVASPSSSSQQFCLRWNNYQTNLTTIFDQLLQNECFVDVTLACDGRSMKAHKMVLSACSPYF 152

  Fly   444 QQIFLENPSSHPILLMADVEASHMAGLLDFMYSGQVNVKYEDLPVFLKVAEAMKIKGLHTEKNLD 508
            |.:..|.|..|||::|.||..|.:..:::|||.|::||..:.:...|::||.:|::||       
  Fly   153 QTLLAETPCQHPIVIMRDVNWSDLKAIVEFMYRGEINVSQDQIGPLLRIAEMLKVRGL------- 210

  Fly   509 SDASDISSPHESDGTECRYERGTHSVNITSGHAAGYGGAPSSQQSSPSPSLNGPNRCPTPLSSGG 573
                                     .::|...||....|.:|.:..||          :|..|..
  Fly   211 -------------------------ADVTHMEAATAAAAAASSERMPS----------SPKESTS 240

  Fly   574 SGNPNYAGFREHIKSKATLAETFMKNLNRNNNNNNSSNNYNHLGGSNGSLNLTEADSNSFAILQA 638
            :....:...||        ||..:                                    |.:|.
  Fly   241 TSRTEHDRERE--------AEELL------------------------------------AFMQP 261

  Fly   639 NSKKML---DSARKQHKYLAKRKILMHYNTELGGEKRLKEMERD--------RYPSAEQHDDALN 692
            ..|...   |.|                      |.||..:||.        |:|||        
  Fly   262 EKKLRTSDWDPA----------------------ELRLSPLERQQGRNVRKRRWPSA-------- 296

  Fly   693 NNHSHAQDNIMEPIITTIVPQTPPPSTHNNNFKIRLVESHHLTNNSNNNQNQSSNNNNSSSSPQS 757
                   |.|..|      |..|.|.:     .:...|...|.......|...|........|.|
  Fly   297 -------DTIFNP------PAPPSPLS-----SLIAAERMELEQKERERQRDCSLMTPPPKPPMS 343

  Fly   758 ND-----CNNDEEALNLVQIPN---ANGSRNREATPTCATPTPDIQLIKREVKTEL--------- 805
            :.     ....|.|::.:.:|:   ..|..:|.:.|  .:.:|..|..:::.:..|         
  Fly   344 SGSTVGATRRLETAIHALDMPSPAATPGPLSRSSRP--HSQSPQQQQAQQQGQLPLPLPLHPHHH 406

  Fly   806 -SPAENLSNNNGHDDEMAGAGFDRKYDDNNNNSGLDMETDSNNNNSKPGGDNN--NGLALALGKH 867
             |||.       |..:.||                     |.::.:.|.||:.  .|.|.|:...
  Fly   407 ASPAP-------HPSQTAG---------------------SAHHPASPAGDSRFPLGPAAAMAAA 443

  Fly   868 KLLSAINRNIEQD-----HPDHEH 886
            :.||.:......:     .|.|.|
  Fly   444 RELSGLGPGPSAEPRLPPPPPHHH 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6118NP_001097806.1 Myb_DNA-bind_4 20..97 CDD:290549
BTB 408..508 CDD:279045 43/99 (43%)
BTB 419..510 CDD:197585 39/90 (43%)
bab1NP_728565.1 BTB 117..216 CDD:279045 44/130 (34%)
BTB 128..213 CDD:197585 39/116 (34%)
HTH_psq 569..614 CDD:283007
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447065
Domainoid 1 1.000 68 1.000 Domainoid score I9675
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 1 1.000 - - otm40394
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.940

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