Protein Alignment CG6118 and chinmo

DIOPT Version :10

• Sequence 1: NP_001097806.1
• Gene: CG6118 / 41884
• FlyBaseID: FBgn0038339
• Length: 967
• Species: Drosophila melanogaster
• Sequence 2: NP_722717.2
• Gene: chinmo / 33343
• FlyBaseID: FBgn0086758
• Length: 840
• Species: Drosophila melanogaster
• Alignment Length: 564
• Identity: 138/564 - (24%)
• Similarity: 207/564 - (36%)
• Gaps: 141/564 - (25%)

  Fly   386 DPNTIDQYLLSWNNFHGNMCRGFHSLQKDEKMVDVTIAAGGKIFKAHKLVLSVCSPYFQQIFLEN 450
            ||.  .|:.|.||:|..|:...|.:|.|.:.:.||.::..|.:||||||:|:.||..|..:|...
  Fly     2 DPQ--QQFCLKWNSFSSNLAITFSNLFKSDLLADVILSCDGVVFKAHKLILAACSKKFADLFENT 64

  Fly   451 PSS-HPILLMADVEASHMAGLLDFMYSGQVNVKYEDLPVFLKVAEAMKIKGLHTE---------K 505
            |:: ..::::......:||.||:|||.|:|:|..|.|..|||.||::::|||.||         :
  Fly    65 PTNGQCVIILEATTPDNMAALLEFMYKGEVHVSQEALNSFLKSAESLQVKGLSTETGRLAAQQAQ 129

  Fly   506 NLDSDASDISSPHESDGTECRYERGTHSV----------------NITSGHAAGYG--------- 545
            ....|.|.:.||............|:.|:                |..||...|.|
  Fly   130 QHMGDLSPLDSPTGRRSVRNSLSGGSSSIVPGGVGIGLGGGATGANSMSGMGIGNGLSLAGMAAG 194

  Fly   546 -------GAPSSQQSSPSPSLNGPNRCPTP--------------LSSGGSGNPNYAGFREHIKSK 589
                   .|.:|..|:.:.|.|..:||.:.              ..|||:||           ..
  Fly   195 GGMAAAANAAASSLSTLAASANIVDRCGSAGANIISGSAAGIGGSHSGGAGN-----------GS 248

  Fly   590 ATLAETFMKNLNRNNNNNNSSNN-----------YNHLGGSNGSLNLTEADSNSFAILQANSKKM 643
            .|:      .:..|...:...||           .:|||||.|.|. .|.||.......::|..|
  Fly   249 GTV------GIGGNGVGSGGGNNGPISLGSGAGAAHHLGGSTGILK-QECDSLMHPGGSSSSSGM 306

  Fly   644 LDSARKQHKYLAKRKILMHYNTELGGEKRLKEMERDRYPSAEQHDDALNNNHSHAQDNIMEPIIT 708
                    .|.....|....|.|   ..|.:.:.|..|...||....|.:....::  ...||
  Fly   307 --------GYTHVPPIYRPINYE---PPRKRAIVRSPYSEQEQRGSVLRDGSKSSE--CPSPI-- 356

  Fly   709 TIVPQTPP---PSTHNNNFKIRLVESHHLTNNSNNNQNQSSNNNNSSSSPQSNDCNNDEEALNLV 770
                ..||   ||:..::......::.|    |.....|||...|.|.|..:.:.|.......:|
  Fly   357 ----NKPPYHRPSSSASSTAPTEADTMH----SERASPQSSRYENHSPSTTAGNGNATSSLERIV 413

  Fly   771 QIPNANGSRNREATPTCATPTPDIQLIKREVKTELSPAENLSNNNGHDD---EMAGAGFDRKYDD 832
            :....|||.| ||...           .||:..|       |.:||.:|   ::....:......
  Fly   414 KSERNNGSAN-EANDD-----------DRELMDE-------STDNGAEDLRVKLENLKYSPPPPP 459

  Fly   833 NNNNSGLDMETDSNN--NNSKPGGDNNNGLALALGKHKLLSAIN 874
            |:|.|    .|..|.  .|.|..|..::.||.::....:|:..|
  Fly   460 NSNTS----STTPNTLLENLKADGTLSSNLAASIAPADMLNVWN 499

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG6118	NP_001097806.1	Myb_DNA-bind_4	20..97	CDD:463994
		BTB_POZ_BAB-like	418..500	CDD:349624	32/82 (39%)
chinmo	NP_722717.2	BTB_POZ_BAB-like	31..115	CDD:349624	32/83 (39%)
		C2H2 Zn finger	519..540	CDD:275368
		C2H2 Zn finger	547..568	CDD:275368