DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6118 and mamo

DIOPT Version :9

Sequence 1:NP_001097806.1 Gene:CG6118 / 41884 FlyBaseID:FBgn0038339 Length:967 Species:Drosophila melanogaster
Sequence 2:NP_572932.2 Gene:mamo / 32353 FlyBaseID:FBgn0267033 Length:1553 Species:Drosophila melanogaster


Alignment Length:660 Identity:145/660 - (21%)
Similarity:254/660 - (38%) Gaps:169/660 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   391 DQYLLSWNNFHGNMCRGFHSLQKDEKMVDVT-IAAGGKIFKAHKLVLSVCSPYFQQIFLENPSSH 454
            :.|.|.|||:..|:...|..|.:|..:|||| :.:.|...:|||:|||.||.|||.:|||:|..|
  Fly     4 EHYCLRWNNYQSNLLGVFSQLLQDGSLVDVTLVCSEGTSIRAHKVVLSACSSYFQSLFLEHPEGH 68

  Fly   455 PILLMADVEASHMAGLLDFMYSGQVNVKYEDLPVFLKVAEAMKIKGLHTEKNLDSDASDISSPHE 519
            .|:::.||..:.:..|::|||.|:|||:|..|...||.||::|:|||   ..:.:..:.:..| |
  Fly    69 LIVILKDVRFAELQTLVEFMYKGEVNVQYCQLSALLKTAESLKVKGL---AEMTNQNTTLREP-E 129

  Fly   520 SDGTECRYERGTHSVNITSGHAAGYGGAPSSQQSSPSPSLN------------------------ 560
            .:....|.:.|           .|.||:......||:.:|:                        
  Fly   130 REPDRLRPQGG-----------GGSGGSAHKAADSPAAALDATAATQAATATATATAAAATSTST 183

  Fly   561 -------------GPNRCPTPLSSGGSGNPNYAGFREHIKSKATLAETFMKNLNRNNNNNNSSNN 612
                         ..:...|..::.||.|...........:.|| |.|.....:.:::..:::..
  Fly   184 SATSAAATAAATAATSASTTATAAAGSSNTTTTTAATTTATCAT-AATSTAATSSSSSVTSAAAA 247

  Fly   613 YNHLGGSNGSLNLTEADSNSFAILQANSKKMLDSARKQHKYLAKRKILMH--------------- 662
            ......::|..:..||.|:|    .:...:..:::.:.....|||...||               
  Fly   248 AAAAASASGVAHSEEATSSS----SSTGGQKREASDRSSPTPAKRSSRMHPADKVDVAEDREQEQ 308

  Fly   663 ------YNTELGGEKRLKEMERDRYPSAEQHD-------DALNNNHSHAQDNIMEPIITTIVPQT 714
                  .:.||.| :.||:.|.|.....::::       |..:::....:|..| |:.....|..
  Fly   309 NQADELLSEELLG-RNLKDEEDDDVDELDENEETKLRGRDEDDDDEDEEEDTPM-PLDLYQRPNV 371

  Fly   715 PPPST---------------------HNNNFKIRLVESHHLTNNSNNNQNQSSNNNNSSSSPQSN 758
            .|.|.                     |.|:       |.:..||:|||.|.||||||::||.:::
  Fly   372 EPKSAAAATAAQQGGSNSLSGSSNACHTNS-------SSNSNNNNNNNNNSSSNNNNNTSSGKTS 429

  Fly   759 DCNNDEEALNLVQIPNANGSRNREATPTCATPTPDIQLIKREVKTELSPAENLSNNNGHDDEMAG 823
            ..:|             .|:.:...|........|                      ..||:..|
  Fly   430 ASSN-------------GGTASSGGTADSVVAVDD----------------------DDDDDDGG 459

  Fly   824 AGFDRKYDDNNNNSGLDMETDSNNNNSKPGGDNNNGLALALGKHKLLSAINRNIEQDHPDHEHQD 888
            ....|:..|:.....:| |.|.:::....|    ...|:|.|..:.|:  ::|:::.|..|.|..
  Fly   460 HHHQRQVMDDRLEQDVD-EEDLDDDVVVVG----PATAMARGIAQRLA--HQNLQRLHHTHHHAQ 517

  Fly   889 QQDREADHGGNNCNSDDNNNNNHSQHLDLSTIKNIATAEILCGLKSKVLKLEEEQRERERERERE 953
            .|..:..|..:..:...::..:|:...|...:..||.:|||           ::..:.|.:.|.:
  Fly   518 HQHSQHHHPHSQHHHTPHHQQHHTHSDDEDAMPVIAKSEIL-----------DDDYDDEMDLEDD 571

  Fly   954 REACRSLSEI 963
            .||..|.:::
  Fly   572 DEADNSSNDL 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6118NP_001097806.1 Myb_DNA-bind_4 20..97 CDD:290549
BTB 408..508 CDD:279045 45/100 (45%)
BTB 419..510 CDD:197585 41/91 (45%)
mamoNP_572932.2 BTB 21..118 CDD:279045 45/99 (45%)
BTB 32..118 CDD:197585 41/88 (47%)
C2H2 Zn finger 1082..1105 CDD:275368
C2H2 Zn finger 1116..1137 CDD:275368
C2H2 Zn finger 1149..1169 CDD:275368
zf-C2H2 1469..1491 CDD:278523
C2H2 Zn finger 1471..1491 CDD:275368
zf-H2C2_2 1483..1506 CDD:290200
C2H2 Zn finger 1499..1519 CDD:275368
zf-H2C2_2 1511..1536 CDD:290200
C2H2 Zn finger 1527..1547 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451883
Domainoid 1 1.000 68 1.000 Domainoid score I9675
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.940

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