DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6118 and si:ch73-193c12.2

DIOPT Version :10

Sequence 1:NP_001097806.1 Gene:CG6118 / 41884 FlyBaseID:FBgn0038339 Length:967 Species:Drosophila melanogaster
Sequence 2:XP_001344933.2 Gene:si:ch73-193c12.2 / 100006062 ZFINID:ZDB-GENE-131127-646 Length:254 Species:Danio rerio


Alignment Length:273 Identity:58/273 - (21%)
Similarity:119/273 - (43%) Gaps:65/273 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 WEAEKVKSLIRLRAELSPLFTGKRNAS--KYAWAVVERELNVPLPLSKIIKKWNNLLQEYKAIK- 84
            |.......||..|...:.||||:|||:  .|...|.|::|...:..:.:.|||.||.|:||.:| 
Zfish    10 WTDANTADLIVWRVTNNSLFTGRRNAAIKAYELYVKEKQLQGKVAPTWVRKKWENLKQKYKDLKS 74

  Fly    85 ---MSEEPKRREWPFFTLMDVYFSDQVNDPSLRLFS------------STKTLKETLDDSVFEDD 134
               ...|.....|.::::||...:.:  :|...:.:            .||..|:          
Zfish    75 LRTADGESASATWKWYSVMDGALNSE--NPITHIITPVRVTIPAPDAPPTKQRKQ---------- 127

  Fly   135 PIIASAIAAATSGAYMDIDELIRRQKERAALAAERKLAAAASGGTGDYKFDLKPMLSNSKFNSNS 199
               |..:.|        :.||.:||:||...||||:              |.:...|.::.:...
Zfish   128 ---ADWLTA--------LQELEKRQEERERQAAERE--------------DERDRRSAAREDERD 167

  Fly   200 EMAKLSKSV--DDLSMQQYKIKQELMRQREQEQQENMVKIKQH------VRQQQQQQ-HQQQQQQ 255
            ..| |.:..  |..:.::.:|::.|:.:||:.::..|...::.      .|:::|:: :::::::
Zfish   168 RRA-LEREAERDRRAAEREEIRERLVLEREERREREMFAREERWEKDMLAREERQERDYREREER 231

  Fly   256 QHHQAQQQQQQRF 268
            :..:|..::::.|
Zfish   232 REREAAAREERLF 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6118NP_001097806.1 Myb_DNA-bind_4 20..97 CDD:463994 26/79 (33%)
BTB_POZ_BAB-like 418..500 CDD:349624
si:ch73-193c12.2XP_001344933.2 None
Blue background indicates that the domain is not in the aligned region.

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