DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atx2 and PBP1

DIOPT Version :9

Sequence 1:NP_732033.1 Gene:Atx2 / 41883 FlyBaseID:FBgn0041188 Length:1084 Species:Drosophila melanogaster
Sequence 2:NP_011694.3 Gene:PBP1 / 853089 SGDID:S000003410 Length:722 Species:Saccharomyces cerevisiae


Alignment Length:718 Identity:157/718 - (21%)
Similarity:239/718 - (33%) Gaps:252/718 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 YNSNDNSLRPTNNKAGAGGG----NGGAAVRPSAQGVYNN-----------TFFMHSATALVGSV 72
            :...|:|   ||::.|....    |||...:.::...|.|           .:.:.::   :||.
Yeast     5 FRKRDSS---TNSRKGGNSDSNYTNGGVPNQNNSSMFYENPEITRNFDDRQDYLLANS---IGSD 63

  Fly    73 VEVRLRSGNIYEGVFRT----FSGNFDIALELPACIKS----------KNLPEEGKVPKHIIFPA 123
            |.|.:.||..|.|:..:    .:...|:.|..|....|          |.|.|.      ::...
Yeast    64 VTVTVTSGVKYTGLLVSCNLESTNGIDVVLRFPRVADSGVSDSVDDLAKTLGET------LLIHG 122

  Fly   124 DTVVTIVAKDFD-----------SQYATAG-----------------AFQTDGAISDKCNGARPD 160
            :.|..:..|:.|           :|..|..                 .|:||..||.  :|....
Yeast   123 EDVAELELKNIDLSLDEKWENSKAQETTPARTNIEKERVNGESNEVTKFRTDVDISG--SGREIK 185

  Fly   161 EKELEPW--DSGA-NGDID----IELDSAANGWDPNEMFRKNENTFGVTSTFDDSLASYTVPLDK 218
            |::||.|  :.|| :.||:    :|.|||:  ||   .|..||..|||.||||:.|  ||..::|
Yeast   186 ERKLEKWTPEEGAEHFDINKGKALEDDSAS--WD---QFAVNEKKFGVKSTFDEHL--YTTKINK 243

  Fly   219 GDSLEFKEAEAKAEKLAAEIENNPT------CRDR---LDLENGDEEALFAAVERPSTE------ 268
            .|. .:.:...:||::|.|||:..|      ..||   :|....|||.|::.|:|...|      
Yeast   244 DDP-NYSKRLQEAERIAKEIESQGTSGNIHIAEDRGIIIDDSGLDEEDLYSGVDRRGDELLAALK 307

  Fly   269 --QDQRGDRGDR-------------------ERNDRDRER--------------EERDRDRDRDR 298
              .....::|:|                   ..|....|.              .|....:...:
Yeast   308 SNSKPNSNKGNRYVPPTLRQQPHHMDPAIISSSNSNKNENAVSTDTSTPAAAGAPEGKPPQKTSK 372

  Fly   299 GNKPRGAGDFQLRE---------------------------TMSSDRYITKQTRSITGPQLSHVG 336
            ..|...:.:.|:.|                           |:.|:..:..:..|.| |....|.
Yeast   373 NKKSLSSKEAQIEELKKFSEKFKVPYDIPKDMLEVLKRSSSTLKSNSSLPPKPISKT-PSAKTVS 436

  Fly   337 MSSQGSGRDRDTRGDGSMMMQSGGGSGQGGSTQSTAALMLAG-----GLKGVGPAPSANASADSS 396
            .::|.|....::|..||.:.|  |.|..|.:|:|:.:|....     |.|.    |..|   |:.
Yeast   437 PTTQISAGKSESRRSGSNISQ--GQSSTGHTTRSSTSLRRRNHGSFFGAKN----PHTN---DAK 492

  Fly   397 SKYSGGS---MVKRKTV----PQGGKVMRN-----------NVPTGGSNVSVS------------ 431
            ....|.|   .:|.|..    .:|.....|           ..||..:.:..|            
Yeast   493 RVLFGKSFNMFIKSKEAHDEKKKGDDASENMEPFFIEKPYFTAPTWLNTIEESYKTFFPDEDTAI 557

  Fly   432 -------QGGNGNSVGQNKGGYQPSMGMPSQYSYQGNSQIMHGSSQYRNQSHMGGAN-----KLN 484
                   |....||:|....|..|:|||        |...|.|..       |||.:     .:|
Yeast   558 QEAQTRFQQRQLNSMGNAVPGMNPAMGM--------NMGGMMGFP-------MGGPSASPNPMMN 607

  Fly   485 GDSNANTNKPLP-QRQMRQYQGSQSNSSLNYGGEPQSLGKPVHGSHGGHPGQNSNSPPL----QT 544
            |.:..:....:| |.|...|..|.          ||.:  ||.||:|...|..:.||.:    ..
Yeast   608 GFAAGSMGMYMPFQPQPMFYHPSM----------PQMM--PVMGSNGAEEGGGNISPHVPAGFMA 660

  Fly   545 AGP 547
            |||
Yeast   661 AGP 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atx2NP_732033.1 SM-ATX 61..128 CDD:291131 16/80 (20%)
PBP1NP_011694.3 PBP1 3..722 CDD:227507 157/718 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343240
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5180
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001866
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR12854
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2220
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.960

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