| Sequence 1: | NP_732033.1 | Gene: | Atx2 / 41883 | FlyBaseID: | FBgn0041188 | Length: | 1084 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_038946069.1 | Gene: | Atxn2 / 288663 | RGDID: | 1306637 | Length: | 1429 | Species: | Rattus norvegicus |
| Alignment Length: | 1259 | Identity: | 307/1259 - (24%) |
|---|---|---|---|
| Similarity: | 457/1259 - (36%) | Gaps: | 417/1259 - (33%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 10 RPTGGG--ASGGISRYN--SNDNSLRP------TNNKAGAGGGNGG---------AAVRP--SAQ 53
Fly 54 GVYNNTFFMHSATALVGSVVEVRLRSGNIYEGVFRTFSGNFDIALEL--PACIKSKNLPEEGKVP 116
Fly 117 KHIIFPADTVVTIVAKDFDSQYATAGAFQTDGAISDKCNGARPDEKELEPWDSG---ANGDIDIE 178
Fly 179 LDSAANGWDPNEMFRKNENTFGVTSTFDDSLASYTVPLDKGDSLEFKEAEAKAEKLAAEIENNPT 243
Fly 244 CRDRLDLENGD--EEALFAAVERPSTEQDQRGDRGDRERNDRDREREERDRDRDRDRGNKPRGAG 306
Fly 307 DFQLRETMSSDRYIT--KQTRSITGPQLSHVGMSSQGSGRDRDTRGDGSMMMQSGGGSGQGGSTQ 369
Fly 370 STAALMLAGG------------------LKGV-GPAPSANASADSSSKYSGGSMVKRKTVPQGGK 415
Fly 416 VMRNNVPTGGSNVSVSQGGNGNSVGQNKGGYQPSMGMPSQYSYQGNSQIMHGSSQYRNQSHMGGA 480
Fly 481 NKLNGDSNANTNKPLPQRQMRQYQGSQSNSSLNYGGEPQSLGKPVHGSHGGHPGQNSNSPPLQTA 545
Fly 546 GPQQQQQQQQQQQQQQQQQQPPQQQQHQNIQPQGQNTQPARQVRTRDNQMQELRQFGQDFQLAPS 610
Fly 611 NT---SPPQQQQQQQQQQQQHQVQQQQQRALQQSASPPQQQQQQQQQQQHVVLHQVPQTHLHQA- 671
Fly 672 ALSQPHYVPQQQPQQA-PLPQQQHVPHHMQQKAQQQQLVETQHQHVQKQHQSQPQVQQPPPQLLQ 735
Fly 736 DPSQQPLPIYHTMPPPQTSPVVVTSPVLLE-----------------QPPPQPMPVVQ------- 776
Fly 777 QQQTQQLATPKPEVSPAPPSSNTTTPTGIASTPTAGVIASAGSEKTTPAAPTPTSNSATVPTGTA 841
Fly 842 ATAGGATGTTPV-----------------VKKHVLNPSAKPFTPRGPSTPNPSRPHTPQTPVPMT 889
Fly 890 NIYTTTGGHVPPAANQPIYV------------------MQPQHPFPPQTHP-------QAGQPPR 929
Fly 930 LRRSNYPPMAASQMHVSA----SAATGQPLITAGPI---PQFIQYG-----------HAPHQQQF 976
Fly 977 QSHTYAPM-----QMRVYP--DQP-------------QQLQFMTQTP-----QSTTP------SP 1010
Fly 1011 GQPHQQF---------HPP-PQPS--PAG------GGPQPAFTP---PTQAATYQLMCVHPQSLL 1054
Fly 1055 ANHY---FPPPTPQHPQQNQQQYQ 1075 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Atx2 | NP_732033.1 | SM-ATX | 61..128 | CDD:291131 | 20/68 (29%) |
| Atxn2 | XP_038946069.1 | PHA03247 | <6..271 | CDD:223021 | |
| SM-ATX | 369..442 | CDD:405176 | 21/72 (29%) | ||
| PBP1 | 455..>600 | CDD:227507 | 66/183 (36%) | ||
| LsmAD | 510..571 | CDD:399606 | 31/60 (52%) | ||
| PRK12323 | <681..888 | CDD:237057 | 59/355 (17%) | ||
| PAM2 | 1024..1038 | CDD:399847 | 8/13 (62%) | ||
| PHA03247 | <1036..1406 | CDD:223021 | 80/306 (26%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 66 | 1.000 | Domainoid score | I9704 |
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 207 | 1.000 | Inparanoid score | I3625 |
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 1 | 1.000 | - | - | FOG0001866 | |
| OrthoInspector | 1 | 1.000 | - | - | otm45721 | |
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | O | PTHR12854 |
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 7 | 7.150 | |||||