DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Atx2 and SPBC21B10.03c

DIOPT Version :9

Sequence 1:NP_732033.1 Gene:Atx2 / 41883 FlyBaseID:FBgn0041188 Length:1084 Species:Drosophila melanogaster
Sequence 2:NP_595684.1 Gene:SPBC21B10.03c / 2540677 PomBaseID:SPBC21B10.03c Length:791 Species:Schizosaccharomyces pombe


Alignment Length:973 Identity:197/973 - (20%)
Similarity:309/973 - (31%) Gaps:330/973 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 SLRPTNNKAGAGGGNGGA------AVRPS--AQGVYNNTFFMHSATALVGSVVEVRLRSGNIYEG 85
            |::.|:.:|.:.....||      |.|.|  ||...|:    |.....:..|.|.|:|.|     
pombe     7 SMKQTSQRAASPNKTQGAKKWSAVAARGSKIAQSATND----HRNVESIKVVPENRVRGG----- 62

  Fly    86 VFRTFSGNFDIALELPACIKSKNLPEEGKVPKHIIFPADTVVTIVAKDFDSQYATAGAFQTDGAI 150
                        :...|...|.|:.......:::     :.|:..||..:||..   .::||.||
pombe    63 ------------VAAKATDSSSNVTSLASSEENV-----SSVSGSAKSNNSQQR---VWKTDVAI 107

  Fly   151 S-DKCNGARPDEKELEPW-----DSGAN-GDIDIELDSAANGWDPNEMFRKNENTFGVTSTFDDS 208
            | :|....|  ::||..|     |:|.. ..::...|:..  ||   .|..||..|||.|.||:.
pombe   108 SAEKRTETR--QRELRRWMPDPEDAGVPLAGLEESTDNVE--WD---QFATNEKLFGVKSHFDED 165

  Fly   209 LASYTVPLDKGDSLEFKEAEAKAEKLAAEIENNPTCRDRLDLENG--------DEEALFAAVERP 265
            |  ||..:|:... ::||.|.:|:::|.|||...|....:..|.|        |||.|::.|.| 
pombe   166 L--YTSRIDRSHP-KYKEKEQEADRIAKEIEGTVTNNIHIAEERGLKVDDSGLDEEDLYSGVHR- 226

  Fly   266 STEQDQRGDRGDR-ERNDRDREREERDRDRDRDRGN----------------KPRGAGDFQLRET 313
            |.:..:...|.:. .:|::|::.:..:......:..                .||..|.    ::
pombe   227 SIDVVRNYTRSNAYNKNNKDQKPKNHEAPHQHPQQKVVPPDDPAIVSHRHLALPRAPGP----DS 287

  Fly   314 MSSDRYITKQTRSITGPQLSHVGMSSQGSGRDRDTRGDGSMMMQSGGG-------SGQGGSTQST 371
            .:::|:...:.::  || ||.           |:..|.....||....       |.|..||:|.
pombe   288 RAAERFFNARRKA--GP-LSR-----------REKEGQIKEFMQFSQSLKIGSLDSKQPSSTKSV 338

  Fly   372 AALMLAGGLKGVGPAPSANASADSSSKYSGGSMVKRKTVPQGGKVMRNNVPTGGSNVSVSQGGNG 436
            |.:.:|...:    .|.|::.|..:...........|.|....:|....|          :..:|
pombe   339 AEVKVADEKQ----LPDASSQATPADSKEPRKEEAEKPVTSATEVSSEKV----------EKVDG 389

  Fly   437 NSVGQNKGGYQPSMGMPSQYSYQGNSQIMHGSSQYRNQSHMGGANKLNGDSNANTNKPLPQRQMR 501
            |:...:|...:||                                       ....||....|.:
pombe   390 NTSSPSKEEEKPS---------------------------------------TEPEKPSVVTQRK 415

  Fly   502 QYQGSQSNSSLNYGGEPQSLGKPVHGSHGGHPGQNSNSPPLQTAGPQQQQQQQQQQQQQQQQQQP 566
            :..|::..:.||        .|.:           |..|  ..|.|                   
pombe   416 ETTGTKLGTKLN--------AKAI-----------SFKP--NVAAP------------------- 440

  Fly   567 PQQQQHQNIQPQGQNTQPARQVRTRDNQMQELRQFGQDFQLAPSNTSPPQQQQQQQQQQQQHQVQ 631
                    :...|:.|.|::.                    ||.|.|.|...||....:......
pombe   441 --------VFTPGKFTIPSKP--------------------APVNASRPMMPQQSNNSEASIPST 477

  Fly   632 QQQQRAL------QQSASP-----PQQQQQQQQQQQHVVLHQVPQTHLHQAALSQPHYVPQQQPQ 685
            ..|..::      :.|:||     |...:::.......|...|.:.|.....:.:|...|     
pombe   478 TPQSPSVVSNGENKPSSSPVFFNGPVSSEKEPILDNFNVFKNVGEEHQGAEQIDKPFSCP----- 537

  Fly   686 QAPLPQQQHVPHHMQQKAQQQQLVETQHQHVQKQHQSQPQVQQPPPQLLQDPSQQP--LPIYHTM 748
                |.....|:.:||.....: .|......:|...:.|.:    |.::...|..|  :|:|   
pombe   538 ----PTWNTGPNSLQQTIANSR-PEGNSGSAKKAAAANPMI----PSIVLPNSAMPSAMPMY--- 590

  Fly   749 PPPQTSPVVVTSPVLLEQPPPQPMPVVQQQQTQQLATPKPEVSPAPPSSNTTTPTGIASTPTAGV 813
             |..|.|.:         |...|:|    ..|..:..|....|.||      :|.|   |||:|.
pombe   591 -PTPTMPYI---------PVGYPVP----GYTPYMRNPSQHTSVAP------SPNG---TPTSGN 632

  Fly   814 IASAGSEKTTPAAPTPTSNSATVPTGTAATAGGATGTTPVVKKHVLNPSAKP-FTP----RGPST 873
            .::.||......||                             ..:.|.|.| |.|    ||.|.
pombe   633 SSTVGSPMIGYMAP-----------------------------QFIPPYAMPQFPPSGNGRGASA 668

  Fly   874 PNPSRPHTPQTPVPMTNIYTTTGGHVPPAANQ--PIYVMQPQHPFPPQTHPQAGQPPRLRRSN 934
              |:....||....|.  ||..|  |||...|  |...|...|      :|..|..   ||||
pombe   669 --PATYFVPQMGGMMA--YTMNG--VPPMYGQYAPNNGMMNMH------YPMYGDS---RRSN 716

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atx2NP_732033.1 SM-ATX 61..128 CDD:291131 9/66 (14%)
SPBC21B10.03cNP_595684.1 PBP1 1..739 CDD:227507 197/973 (20%)
LsmAD 156..220 CDD:284215 24/66 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5180
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001866
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR12854
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2220
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.030

Return to query results.
Submit another query.